search for: bioinforformat

Displaying 4 results from an estimated 4 matches for "bioinforformat".

problem reading file containing bit vector
2011 Jan 30
2
problem reading file containing bit vector
...alue showing is "Inf" . How should i read this file? as.is/colclasses field in read function is not helping me. Is there any package that can do bitwise operation(and/or) on bitVectors. bitops seems to do that but I need output in bitvector format only. Thanks Fahim -- Fahim Mohammad Bioinforformatics Lab University of Louisville Louisville, KY, USA Ph: +1-502-409-1167 [[alternative HTML version deleted]]
Is there any function to read genbank flat files.
2010 Jun 16
1
Is there any function to read genbank flat files.
...(input_handle, "genbank") in bioPython that convert the genebank sequence into fasta sequence. (One option is to call biopython from R but I am not familiar with python functions so I want to avoid that and I am keeping it as last resort) Thanks and regards. --Fahim -- Fahim Mohammad Bioinforformatics Lab University of Louisville Louisville, KY, USA Ph: +1-502-409-1167 [[alternative HTML version deleted]]
bit wise operation on long bit vector?
2011 Jan 30
2
bit wise operation on long bit vector?
...000000100000001100......................" "ccccc" "000000000000000000000000000000000000000000000000000000000000000000000000000..." "dddddd" "0000000000000000000000000000000000000000000000000000000000000000000000000000.." Thanks -- Fahim Mohammad Bioinforformatics Lab University of Louisville Louisville, KY, USA Ph: +1-502-409-1167 [[alternative HTML version deleted]]
calling a c function from R
2010 Jul 14
1
calling a c function from R
..."Output file not given.\n" ); } } else {printf("wrong usage: Try Agay!!! correct usage is:= functionName inputfileToParse outFileToWriteInto\n"); } while(fgets(line, 81, fr) != NULL) -- --- -- } Thanks again Fahim -- Fahim Mohammad Bioinforformatics Lab University of Louisville Louisville, KY, USA Ph: +1-502-409-1167 [[alternative HTML version deleted]]