Displaying 14 results from an estimated 14 matches for "all1".
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2009 Sep 29
2
rbind for a list
Dear All,
I´m using the following code:
all1<-gg2[[1]][[1]]; for(i in 1:48){ all1 <- rbind(all1,gg2[[i]][[1]]) }
to create a new matrix that contains all the matrices in a list called gg2.
gg2 is a list that looks like
>> gg2
[[1]]
[[1]][[1]]
<matrix one>
[[2]]
[[2]][[1]]
<matrix two>
.
.
.
[[48]]
[[48]][[1]]
<ma...
2012 Nov 26
1
A problem subsetting a data frame
...t (ALL) from which I would like to subset or extract a set of data based on a factor ($mol.biol). I looked up some example of subsetting in, picked up two commands and tried both but I got error messages as follows
> testset <- subset(ALL, ALL$mol.biol %in% c("BCR/ABL","ALL1/AF4"))
>> Error in c("BCR/ABL", "ALL1/AF4") : unused argument(s) ("ALL1/AF4")
> testset <- ALL[ALL$mol.biol %in% c("BCR/ABL,NEG"), ]
>> Error in ALL[ALL$mol.biol %in% c(BCR/ABL, NEG), ] :
>
>> error in evaluating the a...
2013 Apr 03
5
Can package plyr also calculate the mode?
I am trying to replicate the SAS proc univariate in R. I got most of the
stats I needed for a by grouping in a data frame using:
all1 <- ddply(all,"ACT_NAME", summarise, mean=mean(COUNTS), sd=sd(COUNTS),
q25=quantile(COUNTS,.25),median=quantile(COUNTS,.50),
q75=quantile(COUNTS,.75),
q90=quantile(COUNTS,.90), q95=quantile(COUNTS,.95),
q99=quantile(COUNTS,.99) )
So I got the mean, median std dev,...
2012 Aug 31
2
Conditional merging in R & if then statement
...create table detail2 as
select a.*
from detail a,
pdetail b
where a.TDATE=b.TDATE
and (a.STIM >= b.STIM and a.STIM <=b.MAXTIM)
2) when try if then in R it only applies to the 1st row & not to whole
dataset like in SAS. How do you get round that?
in SAS:
data summary;
set all1;
if entry='a:prop' then pctexec=stkful/stocks*100;
run;
Thanks in advance for your help.
--
View this message in context: http://r.789695.n4.nabble.com/Conditional-merging-in-R-if-then-statement-tp4641936.html
Sent from the R help mailing list archive at Nabble.com.
2016 Oct 20
2
[AVX512BW] Nasty KAND issue
...type is also 4b, but it's not. The
smallest mask register on SKX is 8b. This also implies that the
smallest load/store moves 8b.
We run into problems when we try to optimize ANDs (full test case attached):
%r1 = and <4 x i1> %r0, <i1 -1, i1 -1, i1 -1, i1 -1>
At the IR level the all1s mask looks like the Identity for this
operation, so LLVM will remove it. But it is not the Identity since
this operation should clear the top 4 bits of the 8 bit hardware
register in play. E.g.
kmovb -4(%rsp), %k0
kandb %k0, %k1, %k0
kmovb %k0, -4(%rsp)
I began trac...
2011 Dec 12
0
Rsolnp package: warning messages
...##############################
###################################################################
## MAX FUNCTION
budget=2
library(Rsolnp)
# the objective function to maximize
#NOTE: by default the solver minimizes the objective. therefore the
original minus sign is not used
obj=function(x){
all1=sum(mat%*%x)
Hp=0
for (j in 1:BR){
p_b=mat[j,]%*%x/all1
Hp=Hp+p_b*log(p_b)*br[j]
}
return(Hp)
}
# the equality constraint function:
equal1=function(x){
all2=sum(mat%*%x)
sum_pterm=sum(mat[1:N,]%*%x/all2)
sum_x=sum(x)
return(c(sum_pterm,sum_x))
}
# the right hand side for the constraint
eqB=c(1...
2012 Dec 11
1
Interpretation of ranef output
...t)
Aa-0 0.59679192 0.34824858 2.241424479 -2.335037842 0.775359364
Ag-0 -2.73719135 2.10428715 -0.980046942 -1.832587350 -1.938942967
Ak-1 -0.13221525 1.03282635 -0.624239559 1.594044342 0.313188938
Alc-0 1.16506640 -0.05914007 1.964024728 -1.133954211 1.190791025
ALL1-2 -1.06702524 -0.55728016 -0.019232427 -2.389703709 -1.357733079
Alst-1 -1.59281754 0.23968834 -1.506568899 -0.280839171 -1.558589679
Amel-1 0.46083213 -0.02787653 0.885634543 -0.632460142 0.469048098
So...3 intercepts and two values for the interaction terms.
My questions are:
Whic...
2011 Jul 21
1
Error: bad index in plotmo functions for MARS model (package earth)
...; nir <- gasoline$NIR
> dim( nir )
[1] 60 401
> class( nir )
[1] "AsIs"
>
> oct <- gasoline$octane
>
> mars <- earth( oct ~ nir, nk=300, nfold=10, degree=3, trace=0 )
>
> plotmo( mars )
Error: bad index (missing column in x?)
> plotmo( mars, all1=T )
Error: bad index (missing column in x?)
> plotmo( mars, all1=T, all2=T )
Error: bad index (missing column in x?)
>
> sessionInfo()
R version 2.13.1 (2011-07-08)
Platform: i386-pc-mingw32/i386 (32-bit)
locale:
[1] LC_COLLATE=Portuguese_Brazil.1252
LC_CTYPE=Portuguese_Brazil.1252...
2016 Oct 20
2
[AVX512BW] Nasty KAND issue
...er on SKX is 8b. This also implies that the
>> smallest load/store moves 8b.
>>
>> We run into problems when we try to optimize ANDs (full test case attached):
>>
>> %r1 = and <4 x i1> %r0, <i1 -1, i1 -1, i1 -1, i1 -1>
>>
>> At the IR level the all1s mask looks like the Identity for this
>> operation, so LLVM will remove it. But it is not the Identity since
>> this operation should clear the top 4 bits of the 8 bit hardware
>> register in play. E.g.
>
> No, this operation alone does not need to clear the upper bit, they...
2016 Oct 20
2
[AVX512BW] Nasty KAND issue
...gt; smallest load/store moves 8b.
>>>>
>>>> We run into problems when we try to optimize ANDs (full test case attached):
>>>>
>>>> %r1 = and <4 x i1> %r0, <i1 -1, i1 -1, i1 -1, i1 -1>
>>>>
>>>> At the IR level the all1s mask looks like the Identity for this
>>>> operation, so LLVM will remove it. But it is not the Identity since
>>>> this operation should clear the top 4 bits of the 8 bit hardware
>>>> register in play. E.g.
>>> No, this operation alone does not need t...
2015 Mar 24
4
Aleatoriedad
Hola de nuevo, ya empiezo a ser pesado ¿no? bueno, no importa porque
aprendemos todos. Eso, al menos, me parece.
Hoy estuve estudiando en R el tema de la aleatoriedad. Veo que hay
múltiples posibilidades pero me están chocando mucho. Encuentro que el
generador de números pseudo aleatorios es más pseudo de lo que debería.
Me explico, quiero generar 0 y 1 aleatorios. Estoy trabajando con una
2013 Apr 03
1
Select single probe-set with median expression from multiple probe-sets corresponding to same gene -AFFY
Hello All,
I need your help. I am analysing affymetrix data and have to select the
probe-set that has median expression among all the probe-sets for same
gene. This way I want to remove the redundancy by keeping the analysis
to single gene entry level. I am fully aware that it is not a nice thing
to do but I just have to do it.
To do so, I came across 'findLargest' function of
2003 Feb 10
2
problems using lqs()
Dear List-members,
I found a strange behaviour in the lqs function.
Suppose I have the following data:
y <- c(7.6, 7.7, 4.3, 5.9, 5.0, 6.5, 8.3, 8.2, 13.2, 12.6, 10.4, 10.8,
13.1, 12.3, 10.4, 10.5, 7.7, 9.5, 12.0, 12.6, 13.6, 14.1, 13.5, 11.5,
12.0, 13.0, 14.1, 15.1)
x1 <- c(8.2, 7.6,, 4.6, 4.3, 5.9, 5.0, 6.5, 8.3, 10.1, 13.2, 12.6, 10.4,
10.8, 13.1, 13.3, 10.4, 10.5, 7.7, 10.0, 12.0,
2011 Dec 16
5
[Bug 8666] New: --debug=all9 fail
https://bugzilla.samba.org/show_bug.cgi?id=8666
Summary: --debug=all9 fail
Product: rsync
Version: 3.1.0
Platform: All
OS/Version: All
Status: NEW
Severity: normal
Priority: P5
Component: core
AssignedTo: wayned at samba.org
ReportedBy: chris at onthe.net.au
QAContact: rsync-qa at