Displaying 9 results from an estimated 9 matches for "3_at".
2003 Sep 11
1
discrepancy between R and Splus lm.influence() functions for family=Gamma(link=identity)
...> test3
sj030110 sj030111 sj030112 control.ppm
AFFX-DapX-M_at 216 236 227 13.3
AFFX-DapX-5_at 97 114 108 6.7
AFFX-CreX-5_at 1107 1021 1661 166.7
AFFX-BioB-5_at 595 511 772 83.3
AFFX-BioDn-3_at 3505 3059 4646 666.7
AFFX-BioB-3_at 2691 2310 3651 500.0
AFFX-CreX-3_at 189 198 262 20.0
AFFX-BioC-5_at 97 82 134 10.0
AFFX-BioC-3_at 286 236 381 33.3
AFFX-DapX-3_at 40 35...
2005 Nov 25
1
read.table without sep
...ion.
Thanks,
Vasu.
-------------- next part --------------
14A_U133A_StatPairs 14A_U133A_Detection 14B_U133A_Signal 88A_U133A_Signal 88B_U133A_Signal 183A_U133A_Signal 183B_U133A_Signal
AFFX-BioB-5_at 403.0 409.3 611.5 569.2 536.6 580.2
AFFX-BioB-M_at 757.3 574.4 826.7 595.3 755.2 956.0
AFFX-BioB-3_at 284.4 327.3 421.6 336.6 391.3 412.6
AFFX-BioC-5_at 2314.2 1685.3 2264.7 2204.1 2233.1 2458.4
AFFX-BioC-3_at 1574.5 1273.0 1484.6 1321.2 1474.7 1774.1
AFFX-BioDn-5_at 2333.7 1796.8 2464.5 2372.5 2095.9 2735.7
AFFX-BioDn-3_at 13673.9 11463.9 13624.7 14513.9 12934.1 16293.1
AFFX-CreX-5_at 17778.8...
2005 Nov 25
1
read.table without sep
...ion.
Thanks,
Vasu.
-------------- next part --------------
14A_U133A_StatPairs 14A_U133A_Detection 14B_U133A_Signal 88A_U133A_Signal 88B_U133A_Signal 183A_U133A_Signal 183B_U133A_Signal
AFFX-BioB-5_at 403.0 409.3 611.5 569.2 536.6 580.2
AFFX-BioB-M_at 757.3 574.4 826.7 595.3 755.2 956.0
AFFX-BioB-3_at 284.4 327.3 421.6 336.6 391.3 412.6
AFFX-BioC-5_at 2314.2 1685.3 2264.7 2204.1 2233.1 2458.4
AFFX-BioC-3_at 1574.5 1273.0 1484.6 1321.2 1474.7 1774.1
AFFX-BioDn-5_at 2333.7 1796.8 2464.5 2372.5 2095.9 2735.7
AFFX-BioDn-3_at 13673.9 11463.9 13624.7 14513.9 12934.1 16293.1
AFFX-CreX-5_at 17778.8...
2012 Nov 21
0
Lattice and a color problem
...12 lines with a blue color. Can anybody explain me, why it is not possible to get the blue color only in the rows where "blue" is indicated?
Glad to hear from you.
All the best
Peter
#### DATA#####
Var1 Var2 Freq
208869_s_at JT 10.6802376685463
203394_s_at JT 10.0160470327077
201533_at JT 9.58401500697783
216520_s_at JT 9.07764840614892
210999_s_at JT 9.00219110130877
212284_x_at JT 8.62193952504277
203752_s_at JT 8.69193736253539
203574_at JT 8.41492571590263
219629_at JT 8.19111292436667
201473_at JT 8.035082989931
210592_s_at JT 8.00639829720742
200768_s_at JT 7.88012483915651...
2006 Jan 30
0
Anova help
...erent experiments(columns 2 to 7 are
experiments).
Gene
14A_U133A_Detection
14B_U133A_Signal
88A_U133A_Signal
88B_U133A_Signal
183A_U133A_Signal
183B_U133A_Signal
AFFX-BioB-5_at
403
409.3
611.5
569.2
536.6
580.2
AFFX-BioB-M_at
757.3
574.4
826.7
595.3
755.2
956
AFFX-BioB-3_at
284.4
327.3
421.6
336.6
391.3
412.6
AFFX-BioC-5_at
2314.2
1685.3
2264.7
2204.1
2233.1
2458.4
AFFX-BioC-3_at
1574.5
1273
1484.6
1321.2
1474.7
1774.1
AFFX-BioDn-5_at
2333.7
1796.8
2464.5
2372.5
2095.9
2735.7
AFFX-BioDn-3_at
13673.9
11463.9
13624.7
14513.9
12934.1
162...
2010 Nov 12
0
drosophila2cdf in simpleaffy / affyQCReport
...lity control with the packages
simpleaffy and affyQCReport with the drosophila chip 2.0
At first I got the messeage, that the *.qcdef file is not there. I followed
the instructions in tha manual and created the file like that:
array drosophila2cdf
alpha1 0.05
alpha2 0.065
spk bioB AFFX-r2-Ec-bioB-3_at
spk bioC AFFX-r2-Ec-bioC-3_at
spk bioD AFFX-r2-Ec-bioD-3_at
spk creX AFFX-r2-P1-cre-3_at
ratio actin3/actin5 AFFX-Dros-ACTIN_3_at AFFX-Dros-ACTIN_5_at
ratio actin3/actinM AFFX-Dros-ACTIN_3_at AFFX-Dros-ACTIN_M_f_at
ratio gapdh3/gapdh5 AFFX-Dros-GAPDH_3_at AFFX-Dros-GAPDH_5_at
ratio gapdh3/gapdhM AF...
2005 Dec 01
1
Transfer String Array from R to java
...frame which has the following data.
data<-read.table("table.txt",header=TRUE)
data
X14A_U133A_StatPairs X14A_U133A_Detection X14B_U133A_Signal
1 AFFX-BioB-5_at 403.0 409.3
2 AFFX-BioB-M_at 757.3 574.4
3 AFFX-BioB-3_at 284.4 327.3
4 AFFX-BioC-5_at 2314.2 1685.3
5 AFFX-BioC-3_at 1574.5 1273.0
6 AFFX-BioDn-5_at 2333.7 1796.8
7 AFFX-BioDn-3_at 13673.9 11463.9
8 AFFX...
2012 Nov 22
1
ggplot2 and the legend
...p3 <- p2 + facet_grid(.~Var2)
plot(p3)
#### THE DATA #
#class(DATA) = data.frame
#class(DATA$Var1) = class(DATA$Var2) = factor
#class(DATA$Freq) = numeric
#class(DATA$col) = character
Var1 Var2 Freq col
1 208869_s_at JT 10.6802376685463 blue
2 203394_s_at JT 10.0160470327077 blue
3 201533_at JT 9.58401500697783 blue
4 216520_s_at JT 9.07764840614892 blue
5 210999_s_at JT 9.00219110130877 green
6 212284_x_at JT 8.62193952504277 blue
7 203752_s_at JT 8.69193736253539 green
8 203574_at JT 8.41492571590263 blue
9 219629_at JT 8.19111292436667 blue
10 201473_at JT 8.035082989931 green
11 21...
2009 May 31
2
convert the contents of a date.frame to a matrix
Dear R user,
I am trying to convert the contents of a date.frame to a matrix. Since there
are negative values in the date.frame, when I use data.matrix(x,
rownames.force = NA), the resulting matrix is not the same as the original
one. Basically I think R treats the numbers in the date.frame as character
and converts it to corresponding numerics.
Any idea on this issue?
Many Thanks,
Hongyuan