search for: 34412.1

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2006 Feb 09
0
Color key in Heat map
Hi all, I am trying to produce a heatmap to display clustering of similar rows in the data given below. For each given row, different colors are used to represent the corresponding column value. I want to display the values of the colors in the form of a color key added to the heatmap. Is there anyway of doing this? > z[1:10,1:6] [,1] [,2] [,3] [,4] [,5] [,6] [1,]
2006 Jan 30
0
Anova help
Hello all, I am trying to perform ANOVA on my sample data given below to see if any gene(column 1 stands for gene names) is differentially expressed after subjecting it to the 6 different experiments(columns 2 to 7 are experiments). Gene 14A_U133A_Detection 14B_U133A_Signal 88A_U133A_Signal 88B_U133A_Signal 183A_U133A_Signal 183B_U133A_Signal AFFX-BioB-5_at 403 409.3 611.5
2005 Nov 25
1
read.table without sep
Hello all, I have a data file table.txt which i have attached. I am trying to pass the columns as arguments to a function "totnorm" where i am displaying a total normalization plot. The function is given below: totnorm<-function(x,y){scale<-sum(x)/sum(y);xlab<-colnames(x);ylab<-colnames(y);x1<-x[[1]];y1<-scale*y[[1]];plot(x1,y1,xlab=xlab,ylab=ylab,col=6, col.lab=4);}
2005 Nov 25
1
read.table without sep
Hello all, I have a data file table.txt which i have attached. I am trying to pass the columns as arguments to a function "totnorm" where i am displaying a total normalization plot. The function is given below: totnorm<-function(x,y){scale<-sum(x)/sum(y);xlab<-colnames(x);ylab<-colnames(y);x1<-x[[1]];y1<-scale*y[[1]];plot(x1,y1,xlab=xlab,ylab=ylab,col=6, col.lab=4);}