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2001 Apr 17
4
cannot allocate vector of size 71773 Kb (PR#915)
Full_Name: Doug Hershberger Version: 1.2.2 OS: Red Hat-Linux 7.0 Submission from: (NULL) (216.99.65.36) In the R FAQ I find the following entry explaining that R no longer has problems with memory. http://cran.r-project.org/doc/FAQ/R-FAQ.html#Why%20does%20R%20run%20out%20of%20of%20memory%3f However in my installation: R Version 1.2.2 (2001-02-26) Installed from the red hat RPM on your site on a Red Hat 7.0 i686 I get the following error when working with large data sets: > source("/usr/local/genex/rcluster/lib/rcluster/r/hcluster.r");...
2008 Oct 31
4
Help needed with Waterfall plot
...following slides presented at ASCO 2007 by Axel Grothey. Link is http://media.asco.org/player/default.aspx?LectureID=AG265&conferenceFolder=GI2007&SessionFolder=Poster&slideonly=yes&TrackID=N929&LectureTitle=Waterfall%20plots%20provide%20detailed%20information%20on%20magnitude%20of%20response%20to%20conventional%20chemotherapy%20in%20colorectal%20cancer%3a%20Lessons%20learned%20from%20N9741.&Key=vm_45_3_26_265&SpeakerName=%3b%20Presenter%3a%20Axel%20Grothey%2c%20MD&mediaURL=%2fmedia&ServerName=media.asco.org&max=12&ext=jpg&useASX=false&playtype...
2018 May 08
3
help with json data from the web into data frame in R
...David, .. I think I've got it :-) Please let me know if you see anything glaringly wrong with this: library(RCurl) zWebObj <- postForm("https://www.semantic-mediawiki.org/w/api.php", "action" = "ask", "query" = "[[Category:City]]|?Capital%20of|?Has%20area", "format" = "json" .opts = list(ssl.verifypeer = FALSE) ) Thank you! -Rich -----Original Message----- From: R-help [mailto:r-help-bounces at r-project.org] On Behalf Of Evans, Richard K. (GRC-H000) Sent: Tuesday, May 08, 2018 12:51 PM To: David Winsemiu...
2017 Dec 27
2
Numerical stability in chisq.test
The chisq.test on line 57 contains following code: STATISTIC <- sum(sort((x - E)^2/E, decreasing = TRUE)) However, based on book "Accuracy and stability of numerical algorithms" available from: http://ftp.demec.ufpr.br/CFD/bibliografia/Higham_2002_Accuracy%20and%20Stability%20of%20Numerical%20Algorithms.pdf Table 4.1 on page 89, it is better to sort the data in increasing order than in decreasing order, when the data are non-negative. An example: x = matrix(c(rep(1.1, 10000)), 10^16, nrow = 10001, ncol = 1) # We have a vector with 10000*1.1 and 1*10^16 c(sum(sort(x,...
2018 May 08
3
help with json data from the web into data frame in R
...tabular result, so it doesn't "fit" into a tabular structure. -- David. > As seen in the following example > > library("rjson") > result <- fromJSON(file = "https://www.semantic-mediawiki.org/w/api.php?action=ask&query=[[Category:City]]|?Capital%20of|?Has%20area&format=json") > json_data_frame <- as.data.frame(result) > print(json_data_frame) > > which results in: > >> library("rjson") > > Warning message: > package ?rjson? was built under R version 3.4.4 > >> result <- fromJS...
2006 Nov 09
5
DUNDi precache
Does anyone have any information on how to use DUNDi precaching? Mark Spencer made a post 2 years ago where he hinted it may be possible to configure DUNDi such that you could centralise your DUNDi registration info by using precaching, instead of having each DUNDi peer meshed with every other one... http://lists.digium.com/pipermail/dundi/2004-October/000189.html However, it seems that no
2018 May 08
0
help with json data from the web into data frame in R
...s with a fromJSON call And 2) why the json data from the example link doesn't convert to a data frame. As seen in the following example library("rjson") result <- fromJSON(file = "https://www.semantic-mediawiki.org/w/api.php?action=ask&query=[[Category:City]]|?Capital%20of|?Has%20area&format=json") json_data_frame <- as.data.frame(result) print(json_data_frame) which results in: > library("rjson") Warning message: package ?rjson? was built under R version 3.4.4 > result <- fromJSON(file = "https://www.semantic-mediawiki.org/w/...
2011 Apr 08
0
Time Series Clustering for SAR data
...2) Problem: the date are not in a regular interval but like: 12-05-2009 14-05-2009 20-05-2009 and so on for each date I've many measurement that correspond to displacement registered in many points i.e. http://www.terrafirma.eu.com/Documents/Workshops/WS%206/Advanced%20interpretation%20of%20PSI%20time%20series%20for%20mapping%20and%20characterization%20of%20geological%20hazards%20Naro%20(Italy).pdf HERE So it possible to built a TS? 3) It is possible to identify and to group TS that show simlar trend? and how I can make this? For Example all TS that show seasonal trend I as...
2002 May 24
0
2.2.4 and XP Pro
...(as of today) registry fix on the laptop, but when I browse to the samba server in network neighborhood, I get the message: \\Localhost <file:///\\Localhost%20is%20not%20accessible.%20You%20might%20not%20have %20permission%20to%20use%20this%20network%20resource.%20Contact%20the%20 administrator%20of%20this%20server%20to%20find%20out%20if%20you%20have%2 0access%20permissions.%20%20You%20were%20not%20connected%20because%20a%2 0duplicate%20name%20exists%20on%20the%20network.%20Go%20to%20System%20in %20Control%20Panel%20to%20change%20the%20computer%20name%20and%20try%20a gain.> is not accessib...
2018 May 08
0
help with json data from the web into data frame in R
...tabular result, so it doesn't "fit" into a tabular structure. -- David. > As seen in the following example > > library("rjson") > result <- fromJSON(file = "https://www.semantic-mediawiki.org/w/api.php?action=ask&query=[[Category:City]]|?Capital%20of|?Has%20area&format=json") > json_data_frame <- as.data.frame(result) > print(json_data_frame) > > which results in: > >> library("rjson") > > Warning message: > package ?rjson? was built under R version 3.4.4 > >> result <- fromJS...
2005 Dec 16
6
active record outside of rails
I really like how Active Record logs the SQL that is executed inside of rails. Is there a way to get the SQL output when using Active Record outside of rails? Thanks, phil _______________________________________________ Rails mailing list Rails-1W37MKcQCpIf0INCOvqR/iCwEArCW2h5@public.gmane.org http://lists.rubyonrails.org/mailman/listinfo/rails
2018 May 08
0
help with json data from the web into data frame in R
...got it :-) > Please let me know if you see anything glaringly wrong with this: > > library(RCurl) > zWebObj <- postForm("https://www.semantic-mediawiki.org/w/api.php", > "action" = "ask", > "query" = "[[Category:City]]|?Capital%20of|?Has%20area", > "format" = "json" > .opts = list(ssl.verifypeer = FALSE) > ) > The R interpreter tells me there's a missing comma after the line: "format" = "json" Fixing that syntactic error I get: str(zWebObj) # ---bein consol...
2018 May 08
3
help with json data from the web into data frame in R
Right. I'm trying to access a server within my organization which has a cert error that I cannot fix. The example link I provided was to a site on the web that does not have the cert error. From the linux shell I use the "-k" switch with cURL to ignore cert errors.. is there an equivalent in the R world? -Rich -----Original Message----- From: David Winsemius [mailto:dwinsemius
2018 May 09
1
help with json data from the web into data frame in R
...And 2) why the json data from the example link doesn't convert to a data frame. As seen in the following example library("rjson") result <- fromJSON(file = "https://www.semantic-mediawiki.org/w/api.php?action=ask&query=[[Category:City]]|?Capital%20of|?Has%20area&format=json") json_data_frame <- as.data.frame(result) print(json_data_frame) which results in: > library("rjson") Warning message: package ?rjson? was built under R version 3.4.4 > result <- fromJSON(file =...
2008 Apr 06
6
[Bug 15377] New: unable to watch DoctorWho
...&pid=b009w049&title=Partners%20In%20Crim e&summary=Donna%20is%20determined%20to%20find%20the%20Do ctor%20again%20- %20even%20if%20it%20means%20braving%20the%20villainous%2 0Miss%20Foster%20and%20her%20hordes%20of%20sinister%20Ad ipose OS/Version: All Status: NEW Severity: normal Priority: medium Component: library AssignedTo: swfdec at lists.freedesktop.org ReportedBy: wildfire at progsoc.org QAContact: swfdec at l...
2017 Dec 28
0
Numerical stability in chisq.test
...ith rounding issues (PR#3486): STATISTIC <- sum(sort((x - E) ^ 2 / E, decreasing = TRUE)) -k > However, based on book "Accuracy and stability of numerical algorithms" available from: > http://ftp.demec.ufpr.br/CFD/bibliografia/Higham_2002_Accuracy%20and%20Stability%20of%20Numerical%20Algorithms.pdf > Table 4.1 on page 89, it is better to sort the data in increasing order than in decreasing order, when the data are non-negative. > An example: > x = matrix(c(rep(1.1, 10000)), 10^16, nrow = 10001, ncol = 1) # We have a vector with 10000*1.1 and 1*10^16...
2011 Jul 15
0
JAGS 3.0 and the Ubuntu repositories: A fix for jrags users
...let me know if you have any questions, Michael Rutter's R Launchpad PPA: https://launchpad.net/~marutter/+archive/rrutter Ubuntu CRAN Page: http://cran.r-project.org/bin/linux/ubuntu/ Synaptic Force Version: https://help.ubuntu.com/community/SynapticHowto#How%20to%20force%20the%20installation%20of%20a%20package%20version Apt pin version: http://www.debian.org/doc/manuals/apt-howto/ch-apt-get.en.html#s-pin -- Dr. Michael A. Rutter School of Science Penn State Erie, The Behrend College Station Road Erie, PA 16563 http://math.bd.psu.edu/faculty/rutter
2003 May 19
0
R CMD check creates a syntax error
...test to fail. Furthermore, I got this warning message a lot in my transcript while check was running. Could anyone explain what is going on, or how to get around this? Thanks. P.S. http://r-bugs.biostat.ku.dk/cgi-bin/R/feature%26FAQ?id=1284;expression=WARNING:%20ignoring%20environment%20value%20of%20R_HOME;user=guest#themesg appears related, but it says the error message arises from having R_HOME set when it shouldn't be. I haven't set it, as far as I can tell. Could it be somehow set inside my default R environment? -- Ross Boylan <ross at biostat.ucsf.edu> wk:...
2006 Dec 22
0
plot.mids / Error in plot.new() : figure margins too large
...below). I actually have the same problem. Is it now possible to plot subsets of mids.objects. If yes, how? My datasets has 8 variables with missing values. Thanks in advance, Simon Attachment: From: Roel de Jong <dejongroel <mailto:dejongroel?Subject=Re:%20%5bR%5d%20plot%20of%20mice.mids%20objects> > Date: Fri, 04 Nov 2005 12:57:05 +0100 Hi, it is impossible to plot a subset of the variables at the moment, but we could add it. p.s. The latest version of mice is v1.14, which can be downloaded from CRAN. Roel de Jong. Leo G?rtler wrote: > Hello... &...
2006 Oct 12
0
Is there a function in R to evaluate the adjusted AIC or other statistc where overdispersion existed in GLMs?
...the usual model selection criteria(e.g.deviance,AIC...) in GLMs isn't very good for selecting the best model when overdispersion exist, so we need to adjust the corresponding statistic,see(Fitzmaurice,G.M. (1997) Model selection with overdispersed data<file:///D:/²©Ê¿¿ÎÌâ/Prediction%20model%20of%20Snails/1997/Model%20Selection%20with%20Overdispersed%20Data.pdf>, The Statistician,46(1):81-91.). Is there a function in R to evaluate the adjusted AIC or other statistc where overdispersion existed in GLMs? How should i do in that case? Thanks in advance. -- With Kind Regards, oooO:::::...