search for: 00lock

I am trying to install Rcmdr on my ubuntu machine, but keep getting the following error messages: ERROR: failed to lock directory ?/home/thedoctor/R/i486-pc-linux-gnu-library/2.10? for modifying Try removing ?/home/thedoctor/R/i486-pc-linux-gnu-library/2.10/00LOCK? ERROR: failed to lock directory ?/home/thedoctor/R/i486-pc-linux-gnu-library/2.10? for modifying Try removing ?/home/thedoctor/R/i486-pc-linux-gnu-library/2.10/00LOCK? ERROR: failed to lock directory ?/home/thedoctor/R/i486-pc-linux-gnu-library/2.10? for modifying Try removing ?/home/thedoctor/R/i...

I am running into a problem with the 00LOCK file and .nfs files. It seemed to be caused by the following R is installed on NFS user A has loaded pkg_A containing a dynamically loaded library user B (the administrator) runs install.packages("pkg_A") as the final part of the installation process the 00LOCK directory is remov...

...st line of my .Rprofile is: '.libPaths(new= "~/R_HOME/site-library") #tell R where site-library is' Until R-2.6.0 this was working fine on both machines, but since I have been unable to upgrade packages on the remote machine. Every attempt at upgrade results in a directory '00LOCK' being place in the site-directory and then the upgrade fails. This has happened with R-2.6.0, 2.6.1, and now with R-devel (2.7.0). If I have this setup incorrectly I am puzzled as to why it works with my local machine and why it worked with versions of R prior to 2.6.0. Ideas? Thanks, Mar...

...in another terminal I install CRAN package abc with: ? R CMD INSTALL abc_2.1.tar.gz All deps are already installed. ## With R 3.5 When installing abc the first time with R 3.5 inotifywait reports the following events: 2019-04-24 16:57:42 -- /home/hpages/R/R-3.5.r75051/library/ CREATE,ISDIR 00LOCK-abc 2019-04-24 16:57:42 -- /home/hpages/R/R-3.5.r75051/library/ CREATE,ISDIR abc 2019-04-24 16:57:45 -- /home/hpages/R/R-3.5.r75051/library/ DELETE,ISDIR 00LOCK- Then on subsequent times: 2019-04-24 16:58:14 -- /home/hpages/R/R-3.5.r75051/library/ CREATE,ISDIR 00LOCK-abc 2019-04-24 16:58:14 --...

...gz >> >> All deps are already installed. >> >> ## With R 3.5 >> >> When installing abc the first time with R 3.5 inotifywait reports the >> following events: >> >> 2019-04-24 16:57:42 -- /home/hpages/R/R-3.5.r75051/library/ CREATE,ISDIR >> 00LOCK-abc >> 2019-04-24 16:57:42 -- /home/hpages/R/R-3.5.r75051/library/ >> CREATE,ISDIR abc >> 2019-04-24 16:57:45 -- /home/hpages/R/R-3.5.r75051/library/ DELETE,ISDIR >> 00LOCK- >> >> Then on subsequent times: >> >> 2019-04-24 16:58:14 -- /home/hpages/R/...

When trying to install Rcmdr, I get the following error messages. I am not aware of how to fix the problem, i.e. how to remove the lock. ERROR: failed to lock directory ‘/home/thedoctor/R/i486-pc-linux-gnu-library/2.10’ for modifying Try removing ‘/home/thedoctor/R/i486-pc-linux-gnu-library/2.10/00LOCK’ ERROR: failed to lock directory ‘/home/thedoctor/R/i486-pc-linux-gnu-library/2.10’ for modifying Try removing ‘/home/thedoctor/R/i486-pc-linux-gnu-library/2.10/00LOCK’ ERROR: failed to lock directory ‘/home/thedoctor/R/i486-pc-linux-gnu-library/2.10’ for modifying Try removing ‘/home/thedoctor/R/i...

...> > ? R CMD INSTALL abc_2.1.tar.gz > > All deps are already installed. > > ## With R 3.5 > > When installing abc the first time with R 3.5 inotifywait reports the > following events: > > 2019-04-24 16:57:42 -- /home/hpages/R/R-3.5.r75051/library/ CREATE,ISDIR > 00LOCK-abc > 2019-04-24 16:57:42 -- /home/hpages/R/R-3.5.r75051/library/ CREATE,ISDIR abc > 2019-04-24 16:57:45 -- /home/hpages/R/R-3.5.r75051/library/ DELETE,ISDIR > 00LOCK- > > Then on subsequent times: > > 2019-04-24 16:58:14 -- /home/hpages/R/R-3.5.r75051/library/ CREATE,ISDIR &gt...

...ror when attempting to update packages to my site-library. I have an identical setup on my local Linux machine, but this problem on the remote Linux machine (PPC cluster) started about 3 weeks ago and is present whether I used R-devel or R-2.6.0 or R-2.5.1. Also, of course I manually remove the 00LOCK folder after each failed attempt. Below is my error output, my .Rprofile, and sessionInfo(). Thanks, Mark ERROR: failed to lock directory '/N/hd03/mkimpel/BigRed/R_HOME/site-library' for modifying Try removing '/N/hd03/mkimpel/BigRed/R_HOME/site-library/00LOCK' > sessionInf...

...6 bytes (710 Kb) opened URL ================================================== downloaded 710 Kb ERROR: failed to lock directory '/usr/home/d/068/wangyong/R/x86_64-unknown-linux-gnu-library/2.7' for modifying Try removing '/usr/home/d/068/wangyong/R/x86_64-unknown-linux-gnu-library/2.7/00LOCK' ERROR: failed to lock directory '/usr/home/d/068/wangyong/R/x86_64-unknown-linux-gnu-library/2.7' for modifying Try removing '/usr/home/d/068/wangyong/R/x86_64-unknown-linux-gnu-library/2.7/00LOCK' ERROR: failed to lock directory '/usr/home/d/068/wangyong/R/x86_64-unknown-l...

...aTeX errors when creating DVI version. This typically indicates Rd problems. I ignored it because I didn't want to submit it to CRAN. Then I tried to use R CMD INSTALL to install it. First I get: "mv: cannot move `c:/PROGRA~1/R/rw2011/library/bbHist' to `c:/PROGRA~1/R/rw2011/library/00LOCK/bbHist ': Permission denied" and a bunch of making DLL errors. Then when I tried a second time, I get: open(c:/progra~1/r/rw2011/library/bbHist/DESCRIPTION): No such file or directory I can see a 00LOCK directory is created in the c:/PROGRA~1/R/rw2011/library directory. Any idea why t...

...eason and I go to install another package, I get this message: $ R-2.2.0-64bit --vanilla CMD INSTALL ~/srca/cran/RSQLite_0.4-0.tar.gz ERROR: failed to lock directory '/app/openpkg/lib/R-2.2.0-64bit/lib/R/library' for modifying Try removing '/app/openpkg/lib/R-2.2.0-64bit/lib/R/library/00LOCK' I can remove the lock directory by hand, and then the next package installs, but this makes it quite difficult to download and install a batch of packages from CRAN or Biocondctor! Is this lock directory a new feature with R-2.2.0? Is there a work around in the R build itself or the installat...

...nstalled Ubuntu 2 days ago. I searched the internet and found some similary probs. But still could not work it out. Fehler: konnte das Verzeichnis nicht blockieren ?/home/gunnar/R/i486-pc-linux-gnu-library/2.9? um zu modifizieren Versuche zu entfernen ?/home/gunnar/R/i486-pc-linux-gnu-library/2.9/00LOCK? Fehler: konnte das Verzeichnis nicht blockieren ?/home/gunnar/R/i486-pc-linux-gnu-library/2.9? um zu modifizieren Versuche zu entfernen ?/home/gunnar/R/i486-pc-linux-gnu-library/2.9/00LOCK? Fehler: konnte das Verzeichnis nicht blockieren ?/home/gunnar/R/i486-pc-linux-gnu-library/2.9? um zu modifiz...

...r/local/gfortran/lib -lgfortran As usual, the last challenge seems to be to get rgl installed. Compilation _seems_ to go smoothly, but I now see: Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/Library/Frameworks/R.framework/Versions/3.7/Resources/library/00LOCK-rgl/00new/rgl/libs/rgl.so': dlopen(/Library/Frameworks/R.framework/Versions/3.7/Resources/library/00LOCK-rgl/00new/rgl/libs/rgl.so, 6): Symbol not found: _FT_Attach_File Referenced from: /Library/Frameworks/R.framework/Versions/3.7/Resources/library/00LOCK-rgl/00new/rgl/libs/rgl.so There...

Hi R-Help, I have just downloaded RSPerl_0.7-0.tar.gz under SuSe. If I type owner@linux: ~work> R CMD INSTALL -c RSPerl_0.7-0.tar.gz i get the following error message makedir: cannot create directory '/user/lib/R/library/00LOCK' : Permission denied ERROR: failed to lock directory '/usr/lib/R/library' for modifing I would really appreciate if somebody can help me please. Thanks in advance, Tom __________________________________________________ [[alternative HTML version deleted]]

...zu installieren install.packages("JGR", dep=TRUE) Dann kam folgende Fehlermeldung: Warnmeldungen: {{{ Fehler: konnte das Verzeichnis nicht blockieren ?/home/gunnar/R/i486-pc-linux-gnu-library/2.9? um zu modifizieren Versuche zu entfernen ?/home/gunnar/R/i486-pc-linux-gnu-library/2.9/00LOCK? Fehler: konnte das Verzeichnis nicht blockieren ?/home/gunnar/R/i486-pc-linux-gnu-library/2.9? um zu modifizieren Versuche zu entfernen ?/home/gunnar/R/i486-pc-linux-gnu-library/2.9/00LOCK? Fehler: konnte das Verzeichnis nicht blockieren ?/home/gunnar/R/i486-pc-linux-gnu-library/2.9? um zu modifiz...

...file 'bbHist/src/rbb.c' had CRLF line endings * checking for empty directories * building 'bbHist_0.1-1.tar.gz' And then when I do R CMD INSTALL bbHist, I get open(c:/progra~1/r/rw2011/library/bbHist/DESCRIPTION): No such file or directory The bbHist directory is removed and a 00LOCK directory is created. What I don't understand is if INSTALL removed the bbHist directory, why is it stilling looking for the DESCRIPTION file in that diretory? I'm really puzzled. If anyone has any idea, please let me know. Thanks. > Date: Thu, 06 Oct 2005 08:47:23 +0200 > From: Uwe...

...ent type 'application/x-gzip' length 157441 bytes (153 Kb) opened URL ================================================== downloaded 153 Kb ERROR: failed to lock directory ?/home/ubuntu/R/i486-pc-linux-gnu-library/2.9? for modifying Try removing ?/home/ubuntu/R/i486-pc-linux-gnu-library/2.9/00LOCK? The downloaded packages are in ?/tmp/RtmpFDg2LG/downloaded_packages? Warning message: In install.packages("ISwR") : installation of package 'ISwR' had non-zero exit status -- View this message in context: http://r.789695.n4.nabble.com/Problem-with-installing-a-package-in-R-t...

...; ... ** libs /opt/sfw/R/R-2.2.0/bin/SHLIB: make: not found ERROR: compilation failed for package 'acepack' /opt/sfw/R/R-2.2.0/bin/INSTALL: test: argument expected ERROR: failed to lock directory '/opt/sfw/R/R-2.2.0/library' for modifying Try removing '/opt/sfw/R/R-2.2.0/library/00LOCK' I don't see why I would have to remove the 00LOCK file since it seems to have been created by the very session of R I use to run install.packages(). I'm attaching the complete log. Any insight or feedback will be much appreciated. Thank you, Sarosh Jamal Geo Computing & IT S...

Hi, since a couple of days ago I see failures when using R CMD INSTALL -l lib path-to-src/pkg.tar.gz This occurs in automated library updating via a shell script and is caused by the immediate preceding call to leave an 00LOCK folder even though the package installation of that call succeeded. This occurs at random (no obvious/systematic correlation to package name or or such) and only for packages where an earlier version has been installed into the same library location. e.g. ~/R/hardy$ R-2.9.0/bin/R CMD INSTALL -l R...

...problem will still be triggered.): $ Rscript -e "install.packages('dplyr', repos='https://cloud.r-project.org ')" 4. The installation will fail while trying to move the package to its final location: mv: cannot move '/mnt/share/R/x86_64-redhat-linux-gnu-library/4.3/00LOCK-dplyr/00new/dplyr' to '/mnt/share/R/x86_64-redhat-linux-gnu-library/4.3/dplyr': Permission denied ERROR: moving to final location failed 5. Moving the folder as described in the error manually from the shell succeeds: $ mv /mnt/share/R/x86_64-redhat-linux-gnu-library/4.3/00LOCK-dply...