On Fri, 10 Aug 2018, MacQueen, Don wrote:> I would start by trying to install rgdal by itself, rather than as part of > a "batch" update. As in > > Install.packages('rgdal')Don, rgdal was supposed to be installed, but you have a valid point.> My expectation is that you will see a more complete error message specific > to rgdal, which presumably will provide a clue or pointer.Boy howdy! This is interesting: * installing *source* package ?rgdal? ... ** package ?rgdal? successfully unpacked and MD5 sums checked configure: R_HOME: /usr/lib/R configure: CC: gcc configure: CXX: g++ configure: C++11 support available configure: rgdal: 1.3-4 checking for /usr/bin/svnversion... yes configure: svn revision: 766 checking for gdal-config... /usr/bin/gdal-config checking gdal-config usability... yes configure: GDAL: 2.3.0 checking C++11 support for GDAL >= 2.3.0... yes checking GDAL version >= 1.11.4... yes checking gdal: linking with --libs only... no checking gdal: linking with --libs and --dep-libs... no In file included from /usr/include/gdal.h:45:0, from gdal_test.cc:1: /usr/include/cpl_port.h:187:6: error: #error Must have C++11 or newer. # error Must have C++11 or newer. ^ In file included from /usr/include/gdal.h:49:0, from gdal_test.cc:1: /usr/include/cpl_minixml.h:202:47: error: expected template-name before '<' token class CPLXMLTreeCloser: public std::unique_ptr<CPLXMLNode, CPLXMLTreeCloserDeleter> ^ /usr/include/cpl_minixml.h:202:47: error: expected '{' before '<' token /usr/include/cpl_minixml.h:202:47: error: expected unqualified-id before '<' token In file included from /usr/include/ogr_api.h:45:0, from /usr/include/gdal.h:50, from gdal_test.cc:1: /usr/include/ogr_core.h:79:28: error: expected '}' before end of line /usr/include/ogr_core.h:79:28: error: expected declaration before end of line In file included from /usr/include/gdal.h:45:0, from gdal_test.cc:1: /usr/include/cpl_port.h:187:6: error: #error Must have C++11 or newer. # error Must have C++11 or newer. ^ In file included from /usr/include/gdal.h:49:0, from gdal_test.cc:1: /usr/include/cpl_minixml.h:202:47: error: expected template-name before '<' token class CPLXMLTreeCloser: public std::unique_ptr<CPLXMLNode, CPLXMLTreeCloserDeleter> ^ /usr/include/cpl_minixml.h:202:47: error: expected '{' before '<' token /usr/include/cpl_minixml.h:202:47: error: expected unqualified-id before '<' token In file included from /usr/include/ogr_api.h:45:0, from /usr/include/gdal.h:50, from gdal_test.cc:1: /usr/include/ogr_core.h:79:28: error: expected '}' before end of line /usr/include/ogr_core.h:79:28: error: expected declaration before end of line configure: Install failure: compilation and/or linkage problems. configure: error: GDALAllRegister not found in libgdal. ERROR: configuration failed for package ?rgdal? * removing ?/usr/lib/R/library/rgdal? * restoring previous ?/usr/lib/R/library/rgdal? The downloaded source packages are in ?/tmp/RtmpVGIz3Q/downloaded_packages? Updating HTML index of packages in '.Library' Making 'packages.html' ... done Warning message: In install.packages("rgdal") : installation of package ?rgdal? had non-zero exit status Installed here are: gcc-5.5.0-i586-1_slack14.2 gcc-g++-5.5.0-i586-1_slack14.2 gcc-gfortran-5.5.0-i586-1_slack14.2 gcc-gnat-5.5.0-i586-1_slack14.2 gcc-go-5.5.0-i586-1_slack14.2 gcc-java-5.5.0-i586-1_slack14.2 gcc-objc-5.5.0-i586-1_slack14.2 gccmakedep-1.0.3-noarch-1 and gdal-2.3.0-i586-1_SBo What's C++11? Rich
Rich,
C++11 is a programming language.
Interestingly, someone else asked for help yesterday with exactly the same error
message for rgdal. The subject line was
"Help reinstalling rgdal (Ubuntu 16.04)"
The suggestions were to visit the mailing lists R-sig-geo and/or R-sig-debian.
It's puzzling to me that the output first says
configure: C++11 support available
and then later says
/usr/include/cpl_port.h:187:6: error: #error Must have C++11 or newer.
Maybe the C+11 on the system needs to be a newer version...but this level is
pretty much over my head.
I wouldn't even look at the other error messages until that one has been
solved.
-Don
--
Don MacQueen
Lawrence Livermore National Laboratory
7000 East Ave., L-627
Livermore, CA 94550
925-423-1062
Lab cell 925-724-7509
?On 8/10/18, 9:53 AM, "R-help on behalf of Rich Shepard"
<r-help-bounces at r-project.org on behalf of rshepard at appl-ecosys.com>
wrote:
On Fri, 10 Aug 2018, MacQueen, Don wrote:
> I would start by trying to install rgdal by itself, rather than as part
of
> a "batch" update. As in
>
> Install.packages('rgdal')
Don,
rgdal was supposed to be installed, but you have a valid point.
> My expectation is that you will see a more complete error message
specific
> to rgdal, which presumably will provide a clue or pointer.
Boy howdy! This is interesting:
* installing *source* package ?rgdal? ...
** package ?rgdal? successfully unpacked and MD5 sums checked
configure: R_HOME: /usr/lib/R
configure: CC: gcc
configure: CXX: g++
configure: C++11 support available
configure: rgdal: 1.3-4
checking for /usr/bin/svnversion... yes
configure: svn revision: 766
checking for gdal-config... /usr/bin/gdal-config
checking gdal-config usability... yes
configure: GDAL: 2.3.0
checking C++11 support for GDAL >= 2.3.0... yes
checking GDAL version >= 1.11.4... yes
checking gdal: linking with --libs only... no
checking gdal: linking with --libs and --dep-libs... no
In file included from /usr/include/gdal.h:45:0,
from gdal_test.cc:1:
/usr/include/cpl_port.h:187:6: error: #error Must have C++11 or newer.
# error Must have C++11 or newer.
^
In file included from /usr/include/gdal.h:49:0,
from gdal_test.cc:1:
/usr/include/cpl_minixml.h:202:47: error: expected template-name before
'<' token
class CPLXMLTreeCloser: public std::unique_ptr<CPLXMLNode,
CPLXMLTreeCloserDeleter>
^
/usr/include/cpl_minixml.h:202:47: error: expected '{' before
'<' token
/usr/include/cpl_minixml.h:202:47: error: expected unqualified-id before
'<' token
In file included from /usr/include/ogr_api.h:45:0,
from /usr/include/gdal.h:50,
from gdal_test.cc:1:
/usr/include/ogr_core.h:79:28: error: expected '}' before end of
line
/usr/include/ogr_core.h:79:28: error: expected declaration before end of
line
In file included from /usr/include/gdal.h:45:0,
from gdal_test.cc:1:
/usr/include/cpl_port.h:187:6: error: #error Must have C++11 or newer.
# error Must have C++11 or newer.
^
In file included from /usr/include/gdal.h:49:0,
from gdal_test.cc:1:
/usr/include/cpl_minixml.h:202:47: error: expected template-name before
'<' token
class CPLXMLTreeCloser: public std::unique_ptr<CPLXMLNode,
CPLXMLTreeCloserDeleter>
^
/usr/include/cpl_minixml.h:202:47: error: expected '{' before
'<' token
/usr/include/cpl_minixml.h:202:47: error: expected unqualified-id before
'<' token
In file included from /usr/include/ogr_api.h:45:0,
from /usr/include/gdal.h:50,
from gdal_test.cc:1:
/usr/include/ogr_core.h:79:28: error: expected '}' before end of
line
/usr/include/ogr_core.h:79:28: error: expected declaration before end of
line
configure: Install failure: compilation and/or linkage problems.
configure: error: GDALAllRegister not found in libgdal.
ERROR: configuration failed for package ?rgdal?
* removing ?/usr/lib/R/library/rgdal?
* restoring previous ?/usr/lib/R/library/rgdal?
The downloaded source packages are in
?/tmp/RtmpVGIz3Q/downloaded_packages?
Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
Warning message:
In install.packages("rgdal") :
installation of package ?rgdal? had non-zero exit status
Installed here are:
gcc-5.5.0-i586-1_slack14.2
gcc-g++-5.5.0-i586-1_slack14.2
gcc-gfortran-5.5.0-i586-1_slack14.2
gcc-gnat-5.5.0-i586-1_slack14.2
gcc-go-5.5.0-i586-1_slack14.2
gcc-java-5.5.0-i586-1_slack14.2
gcc-objc-5.5.0-i586-1_slack14.2
gccmakedep-1.0.3-noarch-1
and
gdal-2.3.0-i586-1_SBo
What's C++11?
Rich
______________________________________________
R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
What's C++11? Google it! -- Bert Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip ) On Fri, Aug 10, 2018 at 9:53 AM, Rich Shepard <rshepard at appl-ecosys.com> wrote:> On Fri, 10 Aug 2018, MacQueen, Don wrote: > > I would start by trying to install rgdal by itself, rather than as part of >> a "batch" update. As in >> >> Install.packages('rgdal') >> > > Don, > > rgdal was supposed to be installed, but you have a valid point. > > My expectation is that you will see a more complete error message specific >> to rgdal, which presumably will provide a clue or pointer. >> > > Boy howdy! This is interesting: > > * installing *source* package ?rgdal? ... > ** package ?rgdal? successfully unpacked and MD5 sums checked > configure: R_HOME: /usr/lib/R > configure: CC: gcc > configure: CXX: g++ > configure: C++11 support available > configure: rgdal: 1.3-4 > checking for /usr/bin/svnversion... yes > configure: svn revision: 766 > checking for gdal-config... /usr/bin/gdal-config > checking gdal-config usability... yes > configure: GDAL: 2.3.0 > checking C++11 support for GDAL >= 2.3.0... yes > checking GDAL version >= 1.11.4... yes > checking gdal: linking with --libs only... no > checking gdal: linking with --libs and --dep-libs... no > In file included from /usr/include/gdal.h:45:0, > from gdal_test.cc:1: > /usr/include/cpl_port.h:187:6: error: #error Must have C++11 or newer. > # error Must have C++11 or newer. > ^ > In file included from /usr/include/gdal.h:49:0, > from gdal_test.cc:1: > /usr/include/cpl_minixml.h:202:47: error: expected template-name before > '<' token > class CPLXMLTreeCloser: public std::unique_ptr<CPLXMLNode, > CPLXMLTreeCloserDeleter> > ^ > /usr/include/cpl_minixml.h:202:47: error: expected '{' before '<' token > /usr/include/cpl_minixml.h:202:47: error: expected unqualified-id before > '<' token > In file included from /usr/include/ogr_api.h:45:0, > from /usr/include/gdal.h:50, > from gdal_test.cc:1: > /usr/include/ogr_core.h:79:28: error: expected '}' before end of line > /usr/include/ogr_core.h:79:28: error: expected declaration before end of > line > In file included from /usr/include/gdal.h:45:0, > from gdal_test.cc:1: > /usr/include/cpl_port.h:187:6: error: #error Must have C++11 or newer. > # error Must have C++11 or newer. > ^ > In file included from /usr/include/gdal.h:49:0, > from gdal_test.cc:1: > /usr/include/cpl_minixml.h:202:47: error: expected template-name before > '<' token > class CPLXMLTreeCloser: public std::unique_ptr<CPLXMLNode, > CPLXMLTreeCloserDeleter> > ^ > /usr/include/cpl_minixml.h:202:47: error: expected '{' before '<' token > /usr/include/cpl_minixml.h:202:47: error: expected unqualified-id before > '<' token > In file included from /usr/include/ogr_api.h:45:0, > from /usr/include/gdal.h:50, > from gdal_test.cc:1: > /usr/include/ogr_core.h:79:28: error: expected '}' before end of line > /usr/include/ogr_core.h:79:28: error: expected declaration before end of > line > configure: Install failure: compilation and/or linkage problems. > configure: error: GDALAllRegister not found in libgdal. > ERROR: configuration failed for package ?rgdal? > * removing ?/usr/lib/R/library/rgdal? > * restoring previous ?/usr/lib/R/library/rgdal? > > The downloaded source packages are in > ?/tmp/RtmpVGIz3Q/downloaded_packages? > Updating HTML index of packages in '.Library' > Making 'packages.html' ... done > Warning message: > In install.packages("rgdal") : > installation of package ?rgdal? had non-zero exit status > > Installed here are: > gcc-5.5.0-i586-1_slack14.2 > gcc-g++-5.5.0-i586-1_slack14.2 > gcc-gfortran-5.5.0-i586-1_slack14.2 > gcc-gnat-5.5.0-i586-1_slack14.2 > gcc-go-5.5.0-i586-1_slack14.2 > gcc-java-5.5.0-i586-1_slack14.2 > gcc-objc-5.5.0-i586-1_slack14.2 > gccmakedep-1.0.3-noarch-1 > > and > > gdal-2.3.0-i586-1_SBo > > What's C++11? > > > Rich > > ______________________________________________ > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posti > ng-guide.html > and provide commented, minimal, self-contained, reproducible code. >[[alternative HTML version deleted]]
On Fri, 10 Aug 2018, MacQueen, Don wrote:> C++11 is a programming language.Don, That's what I assumed; a version of c++, which is installed here by default. Perhaps not that verision, but ...> configure: C++11 support available > and then later says > /usr/include/cpl_port.h:187:6: error: #error Must have C++11 or newer.> configure: CXX: g++ > configure: C++11 support available > checking C++11 support for GDAL >= 2.3.0... yes > checking GDAL version >= 1.11.4... yesSince the configuration finds C++11 support available and a sufficiently current version of gdal the warning/errors make no sense to me. FWIW, there's no issue compiling/using gdal on slackware; I've done so for many years. Rich