> On Dec 31, 2016, at 11:22 AM, Elham - via R-help <r-help at
r-project.org> wrote:
>
> hello all,I am following this link
http://genomicsclass.github.io/book/pages/GEOquery.html for importing data.but I
have a problem in a step of (Access GSE Data Tables from GEO).in the example of
tutorial there are 266 samples,but by this function
> dim(pData(gse[[1]]))head(pData(gse[[1]])[, 1:3])
the result in R is:
>
>> dim(pData(gse[[1]]))[1] 266 47> head(pData(gse[[1]])[, 1:3])
title geo_accession statusGSM540108 BC1 GSM540108 Public on
May 05 2010GSM540109 BC2 GSM540109 Public on May 05 2010GSM540110 BC3
GSM540110 Public on May 05 2010GSM540111 BC4 GSM540111 Public on May 05
2010GSM540112 BC5 GSM540112 Public on May 05 2010GSM540113 BC6
GSM540113 Public on May 05 2010
> where is another samples?
> [[alternative HTML version deleted]]
This is the first code seen at that page:
source("http://bioconductor.org/biocLite.R")
biocLite("GEOquery")
You were told earlier that rhelp is NOT the correct place to post questions
about Bioconductor packages. What is the cause of your difficulty in
understanding this fact?
--
David Winsemius
Alameda, CA, USA