Hi, I have a *.Rnw which I can Sweave with no problem, but which cannot be processed by R CMD Rd2pdf --no-clean --force. Th latter stops with creating vignettes ... ERROR Error: processing vignette 'cwhmisc.Rnw' failed with diagnostics: at cwhmisc.Rnw:31, could not find function "cformat" Execution halted Before dissecting my *.Rnw systematically , I wanted to ask, if R CMD Rd2pdf has changed since the last R version. sessionInfo() R version 3.2.1 (2015-06-18) Platform: x86_64-apple-darwin10.8.0 (64-bit) Running under: OS X 10.7.5 (Lion) locale: [1] C attached base packages: [1] tools stats4 splines parallel datasets [6] compiler graphics grDevices stats grid [11] utils methods base other attached packages: [1] survival_2.38-3 spatial_7.3-11 ...... Any ideas ? C. -- Christian W. Hoffmann CH - 8915 Hausen am Albis, Schweiz Rigiblickstrasse 15 b, Tel.+41-44-7640853 mailto: christian at echoffmann.ch home: www.echoffmann.ch
Perhaps this is just my ignorance speaking, but it seems
counterintuitive to me to try to process a *.Rnw file by means of Rd2pdf
which would appear to be designed to process *.Rd files.
I would have thought that "R CMD Sweave ..." would be the appropriate
call. I find that
R CMD Sweave --pdf <whatever>.Rnw
works for me.
cheers,
Rolf Turner
--
Technical Editor ANZJS
Department of Statistics
University of Auckland
Phone: +64-9-373-7599 ext. 88276
On 04/07/16 23:42, Christian Hoffmann wrote:> Hi,
>
> I have a *.Rnw which I can Sweave with no problem, but which cannot be
> processed by R CMD Rd2pdf --no-clean --force.
>
> Th latter stops with
>
> creating vignettes ... ERROR
> Error: processing vignette 'cwhmisc.Rnw' failed with diagnostics:
> at cwhmisc.Rnw:31, could not find function "cformat"
> Execution halted
>
> Before dissecting my *.Rnw systematically , I wanted to ask, if R CMD
> Rd2pdf has changed since the last R version.
>
> sessionInfo()
> R version 3.2.1 (2015-06-18)
> Platform: x86_64-apple-darwin10.8.0 (64-bit)
> Running under: OS X 10.7.5 (Lion)
>
> locale:
> [1] C
>
> attached base packages:
> [1] tools stats4 splines parallel datasets
> [6] compiler graphics grDevices stats grid
> [11] utils methods base
>
> other attached packages:
> [1] survival_2.38-3 spatial_7.3-11
> ......
>
> Any ideas ?
> C.
On 04/07/2016 7:42 AM, Christian Hoffmann wrote:> Hi, > > I have a *.Rnw which I can Sweave with no problem, but which cannot be > processed by R CMD Rd2pdf --no-clean --force.That's not the command you're using. (It would give a "no inputs" error, not a vignette error. If you actually gave the name of a vignette on the command line, it would get very confused, because it's for processing *.Rd files, not *.Rnw files.) I'm guessing you're doing a "build" or "INSTALL".> > Th latter stops with > > creating vignettes ... ERROR > Error: processing vignette 'cwhmisc.Rnw' failed with diagnostics: > at cwhmisc.Rnw:31, could not find function "cformat" > Execution halted > > Before dissecting my *.Rnw systematically , I wanted to ask, if R CMD > Rd2pdf has changed since the last R version.I don't think that is relevant.> > sessionInfo() > R version 3.2.1 (2015-06-18)That's not the latest version. Duncan Murdoch> Platform: x86_64-apple-darwin10.8.0 (64-bit) > Running under: OS X 10.7.5 (Lion) > > locale: > [1] C > > attached base packages: > [1] tools stats4 splines parallel datasets > [6] compiler graphics grDevices stats grid > [11] utils methods base > > other attached packages: > [1] survival_2.38-3 spatial_7.3-11 > ...... > > Any ideas ? > C. >