Carl Sutton
2016-Apr-29 16:19 UTC
[R] selecting columns from a data frame or data table by type, ie, numeric, integer
Good morning RGuru's I have a data frame of 575 columns.? I want to extract only those columns that are numeric(double) or integer to do some machine learning with.? I have searched the web for a couple of days (off and on) and have not found anything that shows how to do this.?? Lots of ways to extract rows, but not columns.? I have attempted to use "(x == y)" indices extraction method but that threw error that == was for atomic vectors and lists, and I was doing this on a data frame. My test code is below #? a technique to get column classes library(data.table) a <- 1:10 b <- c("a","b","c","d","e","f","g","h","i","j") c <- seq(1.1, .2, length = 10) dt1 <- data.table(a,b,c) str(dt1) col.classes <- sapply(dt1, class) head(col.classes) dt2 <- subset(dt1, typeof = "double" | "numeric") str(dt2) dt2?? #? not subset dt2 <- dt1[, list(typeof = "double")] str(dt2) class_data <- dt1[,sapply(dt1,is.integer) | sapply(dt1, is.numeric)] class_data sum(class_data) typeof(class_data) names(class_data) str(class_data) ?Any help is appreciated Carl Sutton CPA [[alternative HTML version deleted]]
William Dunlap
2016-Apr-29 17:50 UTC
[R] selecting columns from a data frame or data table by type, ie, numeric, integer
> dt1[ vapply(dt1, FUN=is.numeric, FUN.VALUE=NA) ]a c 1 1 1.1 2 2 1.0 ... 10 10 0.2 Bill Dunlap TIBCO Software wdunlap tibco.com On Fri, Apr 29, 2016 at 9:19 AM, Carl Sutton via R-help < r-help at r-project.org> wrote:> Good morning RGuru's > I have a data frame of 575 columns. I want to extract only those columns > that are numeric(double) or integer to do some machine learning with. I > have searched the web for a couple of days (off and on) and have not found > anything that shows how to do this. Lots of ways to extract rows, but not > columns. I have attempted to use "(x == y)" indices extraction method but > that threw error that == was for atomic vectors and lists, and I was doing > this on a data frame. > > My test code is below > > # a technique to get column classes > library(data.table) > a <- 1:10 > b <- c("a","b","c","d","e","f","g","h","i","j") > c <- seq(1.1, .2, length = 10) > dt1 <- data.table(a,b,c) > str(dt1) > col.classes <- sapply(dt1, class) > head(col.classes) > dt2 <- subset(dt1, typeof = "double" | "numeric") > str(dt2) > dt2 # not subset > dt2 <- dt1[, list(typeof = "double")] > str(dt2) > class_data <- dt1[,sapply(dt1,is.integer) | sapply(dt1, is.numeric)] > class_data > sum(class_data) > typeof(class_data) > names(class_data) > str(class_data) > Any help is appreciated > Carl Sutton CPA > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code.[[alternative HTML version deleted]]
Carl Sutton
2016-Apr-29 20:07 UTC
[R] selecting columns from a data frame or data table by type, ie, numeric, integer
Thank you Bill Dunlap.? So simple I never tried that approach. Tried dozens of others though, read manuals till I was getting headaches, and of course the answer was simple when one is competent.?? Learning, its a struggle, but slowly getting there. Thanks again ?Carl Sutton CPA On Friday, April 29, 2016 10:50 AM, William Dunlap <wdunlap at tibco.com> wrote: > dt1[ vapply(dt1, FUN=is.numeric, FUN.VALUE=NA) ]? ? a ? c1 ? 1 1.12 ? 2 1.0...10 10 0.2 Bill Dunlap TIBCO Software wdunlap tibco.com On Fri, Apr 29, 2016 at 9:19 AM, Carl Sutton via R-help <r-help at r-project.org> wrote: Good morning RGuru's I have a data frame of 575 columns.? I want to extract only those columns that are numeric(double) or integer to do some machine learning with.? I have searched the web for a couple of days (off and on) and have not found anything that shows how to do this.?? Lots of ways to extract rows, but not columns.? I have attempted to use "(x == y)" indices extraction method but that threw error that == was for atomic vectors and lists, and I was doing this on a data frame. My test code is below #? a technique to get column classes library(data.table) a <- 1:10 b <- c("a","b","c","d","e","f","g","h","i","j") c <- seq(1.1, .2, length = 10) dt1 <- data.table(a,b,c) str(dt1) col.classes <- sapply(dt1, class) head(col.classes) dt2 <- subset(dt1, typeof = "double" | "numeric") str(dt2) dt2?? #? not subset dt2 <- dt1[, list(typeof = "double")] str(dt2) class_data <- dt1[,sapply(dt1,is.integer) | sapply(dt1, is.numeric)] class_data sum(class_data) typeof(class_data) names(class_data) str(class_data) ?Any help is appreciated Carl Sutton CPA ? ? ? ? [[alternative HTML version deleted]] ______________________________________________ R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. [[alternative HTML version deleted]]