Hi, I was planning to use GGally, which required me to upgrade ggplot2 but despite trying multiple times, I have been unable to do so: The ggplot2 downloads and installs, but when I load it, I get the following message:> library("ggplot2", lib.loc="/usr/local/lib/R/site-library")Error in get(method, envir = home) : lazy-load database '/usr/local/lib/R/site-library/ggplot2/R/ggplot2.rdb' is corrupt In addition: Warning message: In get(method, envir = home) : internal error -3 in R_decompress1 Error: package or namespace load failed for ?ggplot2? The session info is as follows:> sessionInfo()R version 3.2.2 (2015-08-14) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 14.04.1 LTS locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=C LC_COLLATE=C LC_MONETARY=C [6] LC_MESSAGES=C LC_PAPER=C LC_NAME=C LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=C LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] scales_0.3.0 reshape2_1.4.1 dplyr_0.4.3 loaded via a namespace (and not attached): [1] Rcpp_0.12.3 assertthat_0.1 digest_0.6.8 MASS_7.3-40 R6_2.1.1 grid_3.2.2 [7] plyr_1.8.3 gtable_0.1.2 DBI_0.3.1 magrittr_1.5 stringi_1.0-1 lazyeval_0.1.10 [13] proto_0.3-10 tools_3.2.2 stringr_1.0.0 munsell_0.4.2 parallel_3.2.2 colorspace_1.2-6 Thanks [[alternative HTML version deleted]]
The usual thing to try in cases like this is another mirror. Another worthwhile step is upgrading your R software to the latest... if only to comply with the Posting Guide. -- Sent from my phone. Please excuse my brevity. On March 3, 2016 9:33:05 PM PST, Burhan ul haq <ulhaqz at gmail.com> wrote:>Hi, > >I was planning to use GGally, which required me to upgrade ggplot2 but >despite trying multiple times, I have been unable to do so: > >The ggplot2 downloads and installs, but when I load it, I get the >following >message: > >> library("ggplot2", lib.loc="/usr/local/lib/R/site-library") >Error in get(method, envir = home) : >lazy-load database >'/usr/local/lib/R/site-library/ggplot2/R/ggplot2.rdb' >is corrupt >In addition: Warning message: >In get(method, envir = home) : internal error -3 in R_decompress1 >Error: package or namespace load failed for ?ggplot2? > >The session info is as follows: > >> sessionInfo() >R version 3.2.2 (2015-08-14) >Platform: x86_64-pc-linux-gnu (64-bit) >Running under: Ubuntu 14.04.1 LTS > >locale: > [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=C > LC_COLLATE=C LC_MONETARY=C > [6] LC_MESSAGES=C LC_PAPER=C LC_NAME=C > LC_ADDRESS=C LC_TELEPHONE=C >[11] LC_MEASUREMENT=C LC_IDENTIFICATION=C > >attached base packages: >[1] stats graphics grDevices utils datasets methods base > >other attached packages: >[1] scales_0.3.0 reshape2_1.4.1 dplyr_0.4.3 > >loaded via a namespace (and not attached): > [1] Rcpp_0.12.3 assertthat_0.1 digest_0.6.8 MASS_7.3-40 > R6_2.1.1 grid_3.2.2 > [7] plyr_1.8.3 gtable_0.1.2 DBI_0.3.1 magrittr_1.5 >stringi_1.0-1 lazyeval_0.1.10 >[13] proto_0.3-10 tools_3.2.2 stringr_1.0.0 munsell_0.4.2 > parallel_3.2.2 colorspace_1.2-6 > > >Thanks > > [[alternative HTML version deleted]] > >______________________________________________ >R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see >https://stat.ethz.ch/mailman/listinfo/r-help >PLEASE do read the posting guide >http://www.R-project.org/posting-guide.html >and provide commented, minimal, self-contained, reproducible code.[[alternative HTML version deleted]]
Thanks. I will try both the options 1) another mirror 2) upgrading R, and revert in case of issues. Br / On Fri, Mar 4, 2016 at 10:56 AM, Jeff Newmiller <jdnewmil at dcn.davis.ca.us> wrote:> The usual thing to try in cases like this is another mirror. > > Another worthwhile step is upgrading your R software to the latest... if > only to comply with the Posting Guide. > -- > Sent from my phone. Please excuse my brevity. > > On March 3, 2016 9:33:05 PM PST, Burhan ul haq <ulhaqz at gmail.com> wrote: >> >> Hi, >> >> I was planning to use GGally, which required me to upgrade ggplot2 but >> despite trying multiple times, I have been unable to do so: >> >> The ggplot2 downloads and installs, but when I load it, I get the following >> message: >> >> library("ggplot2", lib.loc="/usr/local/lib/R/site-library") >>> >> Error in get(method, envir = home) : >> lazy-load database '/usr/local/lib/R/site-library/ggplot2/R/ggplot2.rdb' >> is corrupt >> In addition: Warning message: >> In get(method, envir = home) : internal error -3 in R_decompress1 >> Error: package or namespace load failed for ?ggplot2? >> >> The session info is as follows: >> >> sessionInfo() >>> >> R version >> 3.2.2 (2015-08-14) >> Platform: x86_64-pc-linux-gnu (64-bit) >> Running under: Ubuntu 14.04.1 LTS >> >> locale: >> [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=C >> LC_COLLATE=C LC_MONETARY=C >> [6] LC_MESSAGES=C LC_PAPER=C LC_NAME=C >> LC_ADDRESS=C LC_TELEPHONE=C >> [11] LC_MEASUREMENT=C LC_IDENTIFICATION=C >> >> attached base packages: >> [1] stats graphics grDevices utils datasets methods base >> >> other attached packages: >> [1] scales_0.3.0 reshape2_1.4.1 dplyr_0.4.3 >> >> loaded via a namespace (and not attached): >> [1] Rcpp_0.12.3 assertthat_0.1 digest_0.6.8 MASS_7.3-40 >> R6_2.1.1 grid_3.2.2 >> [7] plyr_1.8.3 gtable_0.1.2 DBI_0.3.1 magrittr_1.5 >> stringi_1.0-1 lazyeval_0.1.10 >> [13] proto_0.3-10 tools_3.2.2 stringr_1.0.0 munsell_0.4.2 >> parallel_3.2.2 colorspace_1.2-6 >> >> >> Thanks >> >> [[alternative HTML version deleted]] >> >> ------------------------------ >> >> R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html >> and provide commented, minimal, self-contained, reproducible code. >> >>[[alternative HTML version deleted]]