R help - Mar 2016 - PCA on SNP genotypes

Hello everyone:

I have about a couple of thousands of samples each with about 100 SNP
genotypes and I would like to do PCA using genotypes. I looked on the
web and found different options available on R for PCA. I was
wondering if I could have advice about the program fits better what I
am trying to do.

Regards,
Mohsen

Mohsen,

Check at Bioconductor.

Andr?s

> El 03/03/2016, a las 9:43, Mohsen Jafarikia <jafarikia at gmail.com>
escribi?:
> 
> Hello everyone:
> 
> I have about a couple of thousands of samples each with about 100 SNP
> genotypes and I would like to do PCA using genotypes. I looked on the
> web and found different options available on R for PCA. I was
> wondering if I could have advice about the program fits better what I
> am trying to do.
> 
> Regards,
> Mohsen
> 
> ______________________________________________
> R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.