Hola buenas, utlimamente estoy teniendo más problemas con mi equipo de los que debería. Bajo windows no me funciona bien Rstudio y bajo linux soy incapaz de instalar rJava. ¿Alguien que sepa de Linux me podría ayudar? He probado a instalar los openJDK y nada. También he probado, para instalar Java, a hacer un: sudo add-apt-repository ppa:webupd8team/java sudo apt-get update && sudo apt-get install oracle-java7-installer Y luego cuando le digo a R (vamos que no me lo instala):> install.packages("rJava")Installing package(s) into ‘/home/hermesh/R/x86_64-pc-linux-gnu-library/2.15’ (as ‘lib’ is unspecified) probando la URL ''http://cran.rstudio.com/src/contrib/rJava_0.9-3.tar.gz'' Content type ''application/x-gzip'' length 537153 bytes (524 Kb) URL abierta =================================================downloaded 524 Kb * installing *source* package ‘rJava’ ... ** package ‘rJava’ successfully unpacked and MD5 sums checked checking for gcc... gcc -std=gnu99 checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc -std=gnu99 accepts -g... yes checking for gcc -std=gnu99 option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -std=gnu99 -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/wait.h that is POSIX.1 compatible... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for string.h... (cached) yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes checking for an ANSI C-conforming const... yes checking whether time.h and sys/time.h may both be included... yes configure: checking whether gcc -std=gnu99 supports static inline... yes checking whether setjmp.h is POSIX.1 compatible... yes checking whether sigsetjmp is declared... yes checking whether siglongjmp is declared... yes checking Java support in R... present: interpreter : ''/usr/bin/java'' archiver : ''/usr/bin/jar'' compiler : ''/usr/bin/javac'' header prep.: ''/usr/bin/javah'' cpp flags : ''-I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include'' java libs : ''-L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64 -L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64/server -ljvm'' checking whether JNI programs can be compiled... yes checking JNI data types... ok checking whether JRI should be compiled (autodetect)... yes checking whether debugging output should be enabled... no checking whether memory profiling is desired... no checking whether threads support is requested... no checking whether callbacks support is requested... no checking whether JNI cache support is requested... no checking whether JRI is requested... yes configure: creating ./config.status config.status: creating src/Makevars config.status: creating R/zzz.R config.status: creating src/config.h === configuring in jri (/tmp/RtmpCErgmn/R.INSTALL57e71df9a069/rJava/jri) configure: running /bin/bash ./configure ''--prefix=/usr/local'' --cache-file=/dev/null --srcdir=. checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking for gcc... gcc -std=gnu99 checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc -std=gnu99 accepts -g... yes checking for gcc -std=gnu99 option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -std=gnu99 -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking whether Java interpreter works... checking whether JNI programs can be compiled... yes checking whether JNI programs can be run... yes checking JNI data types... ok checking whether Rinterface.h exports R_CStackXXX variables... yes checking whether Rinterface.h exports R_SignalHandlers... yes configure: creating ./config.status config.status: creating src/Makefile config.status: creating Makefile config.status: creating run config.status: creating src/config.h ** libs gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g -c Rglue.c -o Rglue.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g -c arrayc.c -o arrayc.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g -c callJNI.c -o callJNI.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g -c callback.c -o callback.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g -c fields.c -o fields.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g -c init.c -o init.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g -c jri_glue.c -o jri_glue.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g -c loader.c -o loader.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g -c otables.c -o otables.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g -c rJava.c -o rJava.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g -c tools.c -o tools.o gcc -std=gnu99 -shared -o rJava.so Rglue.o arrayc.o callJNI.o callback.o fields.o init.o jri_glue.o loader.o otables.o rJava.o tools.o -L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64 -L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64/server -ljvm -L/usr/lib/R/lib -lR (cd ../jri && make) make[1]: se ingresa al directorio «/tmp/RtmpCErgmn/R.INSTALL57e71df9a069/rJava/jri» make -C src JRI.jar make[2]: se ingresa al directorio «/tmp/RtmpCErgmn/R.INSTALL57e71df9a069/rJava/jri/src» /usr/bin/javac -target 1.4 -source 1.4 -d . ../Mutex.java ../RBool.java ../RConsoleOutputStream.java ../REXP.java ../RFactor.java ../RList.java ../RMainLoopCallbacks.java ../RVector.java ../Rengine.java ../package-info.java warning: [options] bootstrap class path not set in conjunction with -source 1.4 1 warning /usr/bin/javah -d . -classpath . org.rosuda.JRI.Rengine gcc -std=gnu99 -c -o Rengine.o Rengine.c -g -Iinclude -DRIF_HAS_CSTACK -DRIF_HAS_RSIGHAND -O2 -pipe -g -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -I/usr/share/R/include -I/usr/share/R/include gcc -std=gnu99 -c -o jri.o jri.c -g -Iinclude -DRIF_HAS_CSTACK -DRIF_HAS_RSIGHAND -O2 -pipe -g -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -I/usr/share/R/include -I/usr/share/R/include gcc -std=gnu99 -c -o Rcallbacks.o Rcallbacks.c -g -Iinclude -DRIF_HAS_CSTACK -DRIF_HAS_RSIGHAND -O2 -pipe -g -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -I/usr/share/R/include -I/usr/share/R/include gcc -std=gnu99 -c -o Rinit.o Rinit.c -g -Iinclude -DRIF_HAS_CSTACK -DRIF_HAS_RSIGHAND -O2 -pipe -g -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -I/usr/share/R/include -I/usr/share/R/include gcc -std=gnu99 -c -o globals.o globals.c -g -Iinclude -DRIF_HAS_CSTACK -DRIF_HAS_RSIGHAND -O2 -pipe -g -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include gcc -std=gnu99 -c -o rjava.o rjava.c -g -Iinclude -DRIF_HAS_CSTACK -DRIF_HAS_RSIGHAND -O2 -pipe -g -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include rjava.c: En la función ‘RJava_init_ctrl’: rjava.c:51:8: aviso: se descarta el valor de devolución de ‘write’, se declaró con el atributo warn_unused_result [-Wunused-result] rjava.c:52:7: aviso: se descarta el valor de devolución de ‘read’, se declaró con el atributo warn_unused_result [-Wunused-result] rjava.c: En la función ‘RJava_request_callback’: rjava.c:39:8: aviso: se descarta el valor de devolución de ‘write’, se declaró con el atributo warn_unused_result [-Wunused-result] rjava.c: En la función ‘RJava_clear_lock’: rjava.c:30:8: aviso: se descarta el valor de devolución de ‘write’, se declaró con el atributo warn_unused_result [-Wunused-result] rjava.c: En la función ‘RJava_request_lock’: rjava.c:22:8: aviso: se descarta el valor de devolución de ‘write’, se declaró con el atributo warn_unused_result [-Wunused-result] gcc -std=gnu99 -o libjri.so Rengine.o jri.o Rcallbacks.o Rinit.o globals.o rjava.o -shared -L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64 -L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64/server -ljvm -L/usr/lib/R/lib -lR /usr/bin/javac -target 1.4 -source 1.4 -d . ../Mutex.java ../RBool.java ../RConsoleOutputStream.java ../REXP.java ../RFactor.java ../RList.java ../RMainLoopCallbacks.java ../RVector.java ../Rengine.java ../package-info.java warning: [options] bootstrap class path not set in conjunction with -source 1.4 1 warning /usr/bin/jar fc JRI.jar org libjri.so make[2]: se sale del directorio «/tmp/RtmpCErgmn/R.INSTALL57e71df9a069/rJava/jri/src» rm -f libjri.so cp src/libjri.so libjri.so /usr/bin/javac -target 1.4 -source 1.4 -classpath src/JRI.jar -d examples examples/rtest.java warning: [options] bootstrap class path not set in conjunction with -source 1.4 Note: examples/rtest.java uses or overrides a deprecated API. Note: Recompile with -Xlint:deprecation for details. 1 warning /usr/bin/javac -target 1.4 -source 1.4 -classpath src/JRI.jar -d examples examples/rtest2.java warning: [options] bootstrap class path not set in conjunction with -source 1.4 Note: examples/rtest2.java uses or overrides a deprecated API. Note: Recompile with -Xlint:deprecation for details. 1 warning make[1]: se sale del directorio «/tmp/RtmpCErgmn/R.INSTALL57e71df9a069/rJava/jri» installing via ''install.libs.R'' to /home/hermesh/R/x86_64-pc-linux-gnu-library/2.15/rJava ** R ** inst ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (rJava) The downloaded source packages are in ‘/tmp/RtmpRQzD0x/downloaded_packages’ [[alternative HTML version deleted]]
Hola, ¿qué tal? ¿Has probado a ejecutar "R CMD javareconf" después de instalar Java? Un saludo, Carlos J. Gil Bellosta http://www.datanalytics.com 2013/2/24 Javier Villacampa González <javier.villacampa.gonzalez en gmail.com>:> Hola buenas, > > utlimamente estoy teniendo más problemas con mi equipo de los que debería. > Bajo windows no me funciona bien Rstudio y bajo linux soy incapaz de > instalar rJava. ¿Alguien que sepa de Linux me podría ayudar? > > He probado a instalar los openJDK y nada. > > También he probado, para instalar Java, a hacer un: > > sudo add-apt-repository ppa:webupd8team/java > > sudo apt-get update && sudo apt-get install oracle-java7-installer > > Y luego cuando le digo a R (vamos que no me lo instala): > >> install.packages("rJava") > Installing package(s) into > ?/home/hermesh/R/x86_64-pc-linux-gnu-library/2.15? > (as ?lib? is unspecified) > probando la URL 'http://cran.rstudio.com/src/contrib/rJava_0.9-3.tar.gz' > Content type 'application/x-gzip' length 537153 bytes (524 Kb) > URL abierta > =================================================> downloaded 524 Kb > > * installing *source* package ?rJava? ... > ** package ?rJava? successfully unpacked and MD5 sums checked > checking for gcc... gcc -std=gnu99 > checking for C compiler default output file name... a.out > checking whether the C compiler works... yes > checking whether we are cross compiling... no > checking for suffix of executables... > checking for suffix of object files... o > checking whether we are using the GNU C compiler... yes > checking whether gcc -std=gnu99 accepts -g... yes > checking for gcc -std=gnu99 option to accept ISO C89... none needed > checking how to run the C preprocessor... gcc -std=gnu99 -E > checking for grep that handles long lines and -e... /bin/grep > checking for egrep... /bin/grep -E > checking for ANSI C header files... yes > checking for sys/wait.h that is POSIX.1 compatible... yes > checking for sys/types.h... yes > checking for sys/stat.h... yes > checking for stdlib.h... yes > checking for string.h... yes > checking for memory.h... yes > checking for strings.h... yes > checking for inttypes.h... yes > checking for stdint.h... yes > checking for unistd.h... yes > checking for string.h... (cached) yes > checking sys/time.h usability... yes > checking sys/time.h presence... yes > checking for sys/time.h... yes > checking for unistd.h... (cached) yes > checking for an ANSI C-conforming const... yes > checking whether time.h and sys/time.h may both be included... yes > configure: checking whether gcc -std=gnu99 supports static inline... > yes > checking whether setjmp.h is POSIX.1 compatible... yes > checking whether sigsetjmp is declared... yes > checking whether siglongjmp is declared... yes > checking Java support in R... present: > interpreter : '/usr/bin/java' > archiver : '/usr/bin/jar' > compiler : '/usr/bin/javac' > header prep.: '/usr/bin/javah' > cpp flags : '-I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include' > java libs : '-L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64 > -L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64/server -ljvm' > checking whether JNI programs can be compiled... yes > checking JNI data types... ok > checking whether JRI should be compiled (autodetect)... yes > checking whether debugging output should be enabled... no > checking whether memory profiling is desired... no > checking whether threads support is requested... no > checking whether callbacks support is requested... no > checking whether JNI cache support is requested... no > checking whether JRI is requested... yes > configure: creating ./config.status > config.status: creating src/Makevars > config.status: creating R/zzz.R > config.status: creating src/config.h > === configuring in jri (/tmp/RtmpCErgmn/R.INSTALL57e71df9a069/rJava/jri) > configure: running /bin/bash ./configure '--prefix=/usr/local' > --cache-file=/dev/null --srcdir=. > checking build system type... x86_64-unknown-linux-gnu > checking host system type... x86_64-unknown-linux-gnu > checking for gcc... gcc -std=gnu99 > checking for C compiler default output file name... a.out > checking whether the C compiler works... yes > checking whether we are cross compiling... no > checking for suffix of executables... > checking for suffix of object files... o > checking whether we are using the GNU C compiler... yes > checking whether gcc -std=gnu99 accepts -g... yes > checking for gcc -std=gnu99 option to accept ISO C89... none needed > checking how to run the C preprocessor... gcc -std=gnu99 -E > checking for grep that handles long lines and -e... /bin/grep > checking for egrep... /bin/grep -E > checking for ANSI C header files... yes > checking whether Java interpreter works... checking whether JNI programs > can be compiled... yes > checking whether JNI programs can be run... yes > checking JNI data types... ok > checking whether Rinterface.h exports R_CStackXXX variables... yes > checking whether Rinterface.h exports R_SignalHandlers... yes > configure: creating ./config.status > config.status: creating src/Makefile > config.status: creating Makefile > config.status: creating run > config.status: creating src/config.h > ** libs > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g > -c Rglue.c -o Rglue.o > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g > -c arrayc.c -o arrayc.o > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g > -c callJNI.c -o callJNI.o > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g > -c callback.c -o callback.o > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g > -c fields.c -o fields.o > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g > -c init.c -o init.o > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g > -c jri_glue.c -o jri_glue.o > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g > -c loader.c -o loader.o > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g > -c otables.c -o otables.o > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g > -c rJava.c -o rJava.o > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I. > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2 -pipe -g > -c tools.c -o tools.o > gcc -std=gnu99 -shared -o rJava.so Rglue.o arrayc.o callJNI.o callback.o > fields.o init.o jri_glue.o loader.o otables.o rJava.o tools.o > -L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64 > -L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64/server -ljvm > -L/usr/lib/R/lib -lR > (cd ../jri && make) > make[1]: se ingresa al directorio > «/tmp/RtmpCErgmn/R.INSTALL57e71df9a069/rJava/jri» > make -C src JRI.jar > make[2]: se ingresa al directorio > «/tmp/RtmpCErgmn/R.INSTALL57e71df9a069/rJava/jri/src» > /usr/bin/javac -target 1.4 -source 1.4 -d . ../Mutex.java ../RBool.java > ../RConsoleOutputStream.java ../REXP.java ../RFactor.java ../RList.java > ../RMainLoopCallbacks.java ../RVector.java ../Rengine.java > ../package-info.java > warning: [options] bootstrap class path not set in conjunction with -source > 1.4 > 1 warning > /usr/bin/javah -d . -classpath . org.rosuda.JRI.Rengine > gcc -std=gnu99 -c -o Rengine.o Rengine.c -g -Iinclude -DRIF_HAS_CSTACK > -DRIF_HAS_RSIGHAND -O2 -pipe -g > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -I/usr/share/R/include > -I/usr/share/R/include > gcc -std=gnu99 -c -o jri.o jri.c -g -Iinclude -DRIF_HAS_CSTACK > -DRIF_HAS_RSIGHAND -O2 -pipe -g > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -I/usr/share/R/include > -I/usr/share/R/include > gcc -std=gnu99 -c -o Rcallbacks.o Rcallbacks.c -g -Iinclude > -DRIF_HAS_CSTACK -DRIF_HAS_RSIGHAND -O2 -pipe -g > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -I/usr/share/R/include > -I/usr/share/R/include > gcc -std=gnu99 -c -o Rinit.o Rinit.c -g -Iinclude -DRIF_HAS_CSTACK > -DRIF_HAS_RSIGHAND -O2 -pipe -g > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic > -I/usr/share/R/include -I/usr/share/R/include > gcc -std=gnu99 -c -o globals.o globals.c -g -Iinclude -DRIF_HAS_CSTACK > -DRIF_HAS_RSIGHAND -O2 -pipe -g > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include > gcc -std=gnu99 -c -o rjava.o rjava.c -g -Iinclude -DRIF_HAS_CSTACK > -DRIF_HAS_RSIGHAND -O2 -pipe -g > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include > rjava.c: En la función ?RJava_init_ctrl?: > rjava.c:51:8: aviso: se descarta el valor de devolución de ?write?, se > declaró con el atributo warn_unused_result [-Wunused-result] > rjava.c:52:7: aviso: se descarta el valor de devolución de ?read?, se > declaró con el atributo warn_unused_result [-Wunused-result] > rjava.c: En la función ?RJava_request_callback?: > rjava.c:39:8: aviso: se descarta el valor de devolución de ?write?, se > declaró con el atributo warn_unused_result [-Wunused-result] > rjava.c: En la función ?RJava_clear_lock?: > rjava.c:30:8: aviso: se descarta el valor de devolución de ?write?, se > declaró con el atributo warn_unused_result [-Wunused-result] > rjava.c: En la función ?RJava_request_lock?: > rjava.c:22:8: aviso: se descarta el valor de devolución de ?write?, se > declaró con el atributo warn_unused_result [-Wunused-result] > gcc -std=gnu99 -o libjri.so Rengine.o jri.o Rcallbacks.o Rinit.o globals.o > rjava.o -shared -L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64 > -L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64/server -ljvm > -L/usr/lib/R/lib -lR > /usr/bin/javac -target 1.4 -source 1.4 -d . ../Mutex.java ../RBool.java > ../RConsoleOutputStream.java ../REXP.java ../RFactor.java ../RList.java > ../RMainLoopCallbacks.java ../RVector.java ../Rengine.java > ../package-info.java > warning: [options] bootstrap class path not set in conjunction with -source > 1.4 > 1 warning > /usr/bin/jar fc JRI.jar org libjri.so > make[2]: se sale del directorio > «/tmp/RtmpCErgmn/R.INSTALL57e71df9a069/rJava/jri/src» > rm -f libjri.so > cp src/libjri.so libjri.so > /usr/bin/javac -target 1.4 -source 1.4 -classpath src/JRI.jar -d examples > examples/rtest.java > warning: [options] bootstrap class path not set in conjunction with -source > 1.4 > Note: examples/rtest.java uses or overrides a deprecated API. > Note: Recompile with -Xlint:deprecation for details. > 1 warning > /usr/bin/javac -target 1.4 -source 1.4 -classpath src/JRI.jar -d examples > examples/rtest2.java > warning: [options] bootstrap class path not set in conjunction with -source > 1.4 > Note: examples/rtest2.java uses or overrides a deprecated API. > Note: Recompile with -Xlint:deprecation for details. > 1 warning > make[1]: se sale del directorio > «/tmp/RtmpCErgmn/R.INSTALL57e71df9a069/rJava/jri» > installing via 'install.libs.R' to > /home/hermesh/R/x86_64-pc-linux-gnu-library/2.15/rJava > ** R > ** inst > ** preparing package for lazy loading > ** help > *** installing help indices > ** building package indices > ** testing if installed package can be loaded > > * DONE (rJava) > > The downloaded source packages are in > ?/tmp/RtmpRQzD0x/downloaded_packages? > > [[alternative HTML version deleted]] > > > _______________________________________________ > R-help-es mailing list > R-help-es en r-project.org > https://stat.ethz.ch/mailman/listinfo/r-help-es >
Muchas gracias Carlos,
pensaba que lo había hecho, por los tutoriales que había seguido.
Para el que le pueda servir. En resumen, instalar rJava en linux es:
Paso 1
sudo add-apt-repository ppa:webupd8team/java
Paso 2
sudo apt-get update && sudo apt-get install oracle-java7-installer
Paso 3
sudo R CMD javareconf
Paso 4
install.packages("rJava")
2013/2/24 Carlos J. Gil Bellosta <cgb@datanalytics.com>
> Hola, ¿qué tal?
>
> ¿Has probado a ejecutar "R CMD javareconf" después de instalar
Java?
>
> Un saludo,
>
> Carlos J. Gil Bellosta
> http://www.datanalytics.com
>
> 2013/2/24 Javier Villacampa González
<javier.villacampa.gonzalez@gmail.com
> >:
> > Hola buenas,
> >
> > utlimamente estoy teniendo más problemas con mi equipo de los que
> debería.
> > Bajo windows no me funciona bien Rstudio y bajo linux soy incapaz de
> > instalar rJava. ¿Alguien que sepa de Linux me podría ayudar?
> >
> > He probado a instalar los openJDK y nada.
> >
> > También he probado, para instalar Java, a hacer un:
> >
> > sudo add-apt-repository ppa:webupd8team/java
> >
> > sudo apt-get update && sudo apt-get install
oracle-java7-installer
> >
> > Y luego cuando le digo a R (vamos que no me lo instala):
> >
> >> install.packages("rJava")
> > Installing package(s) into
> > ‘/home/hermesh/R/x86_64-pc-linux-gnu-library/2.15’
> > (as ‘lib’ is unspecified)
> > probando la URL
''http://cran.rstudio.com/src/contrib/rJava_0.9-3.tar.gz''
> > Content type ''application/x-gzip'' length 537153
bytes (524 Kb)
> > URL abierta
> > =================================================> > downloaded
524 Kb
> >
> > * installing *source* package ‘rJava’ ...
> > ** package ‘rJava’ successfully unpacked and MD5 sums checked
> > checking for gcc... gcc -std=gnu99
> > checking for C compiler default output file name... a.out
> > checking whether the C compiler works... yes
> > checking whether we are cross compiling... no
> > checking for suffix of executables...
> > checking for suffix of object files... o
> > checking whether we are using the GNU C compiler... yes
> > checking whether gcc -std=gnu99 accepts -g... yes
> > checking for gcc -std=gnu99 option to accept ISO C89... none needed
> > checking how to run the C preprocessor... gcc -std=gnu99 -E
> > checking for grep that handles long lines and -e... /bin/grep
> > checking for egrep... /bin/grep -E
> > checking for ANSI C header files... yes
> > checking for sys/wait.h that is POSIX.1 compatible... yes
> > checking for sys/types.h... yes
> > checking for sys/stat.h... yes
> > checking for stdlib.h... yes
> > checking for string.h... yes
> > checking for memory.h... yes
> > checking for strings.h... yes
> > checking for inttypes.h... yes
> > checking for stdint.h... yes
> > checking for unistd.h... yes
> > checking for string.h... (cached) yes
> > checking sys/time.h usability... yes
> > checking sys/time.h presence... yes
> > checking for sys/time.h... yes
> > checking for unistd.h... (cached) yes
> > checking for an ANSI C-conforming const... yes
> > checking whether time.h and sys/time.h may both be included... yes
> > configure: checking whether gcc -std=gnu99 supports static inline...
> > yes
> > checking whether setjmp.h is POSIX.1 compatible... yes
> > checking whether sigsetjmp is declared... yes
> > checking whether siglongjmp is declared... yes
> > checking Java support in R... present:
> > interpreter : ''/usr/bin/java''
> > archiver : ''/usr/bin/jar''
> > compiler : ''/usr/bin/javac''
> > header prep.: ''/usr/bin/javah''
> > cpp flags :
''-I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include''
> > java libs :
''-L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64
> > -L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64/server
-ljvm''
> > checking whether JNI programs can be compiled... yes
> > checking JNI data types... ok
> > checking whether JRI should be compiled (autodetect)... yes
> > checking whether debugging output should be enabled... no
> > checking whether memory profiling is desired... no
> > checking whether threads support is requested... no
> > checking whether callbacks support is requested... no
> > checking whether JNI cache support is requested... no
> > checking whether JRI is requested... yes
> > configure: creating ./config.status
> > config.status: creating src/Makevars
> > config.status: creating R/zzz.R
> > config.status: creating src/config.h
> > === configuring in jri
(/tmp/RtmpCErgmn/R.INSTALL57e71df9a069/rJava/jri)
> > configure: running /bin/bash ./configure
''--prefix=/usr/local''
> > --cache-file=/dev/null --srcdir=.
> > checking build system type... x86_64-unknown-linux-gnu
> > checking host system type... x86_64-unknown-linux-gnu
> > checking for gcc... gcc -std=gnu99
> > checking for C compiler default output file name... a.out
> > checking whether the C compiler works... yes
> > checking whether we are cross compiling... no
> > checking for suffix of executables...
> > checking for suffix of object files... o
> > checking whether we are using the GNU C compiler... yes
> > checking whether gcc -std=gnu99 accepts -g... yes
> > checking for gcc -std=gnu99 option to accept ISO C89... none needed
> > checking how to run the C preprocessor... gcc -std=gnu99 -E
> > checking for grep that handles long lines and -e... /bin/grep
> > checking for egrep... /bin/grep -E
> > checking for ANSI C header files... yes
> > checking whether Java interpreter works... checking whether JNI
programs
> > can be compiled... yes
> > checking whether JNI programs can be run... yes
> > checking JNI data types... ok
> > checking whether Rinterface.h exports R_CStackXXX variables... yes
> > checking whether Rinterface.h exports R_SignalHandlers... yes
> > configure: creating ./config.status
> > config.status: creating src/Makefile
> > config.status: creating Makefile
> > config.status: creating run
> > config.status: creating src/config.h
> > ** libs
> > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I.
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2
-pipe
> -g
> > -c Rglue.c -o Rglue.o
> > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I.
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2
-pipe
> -g
> > -c arrayc.c -o arrayc.o
> > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I.
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2
-pipe
> -g
> > -c callJNI.c -o callJNI.o
> > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I.
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2
-pipe
> -g
> > -c callback.c -o callback.o
> > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I.
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2
-pipe
> -g
> > -c fields.c -o fields.o
> > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I.
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2
-pipe
> -g
> > -c init.c -o init.o
> > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I.
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2
-pipe
> -g
> > -c jri_glue.c -o jri_glue.o
> > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I.
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2
-pipe
> -g
> > -c loader.c -o loader.o
> > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I.
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2
-pipe
> -g
> > -c otables.c -o otables.o
> > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I.
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2
-pipe
> -g
> > -c rJava.c -o rJava.o
> > gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I.
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic -O2
-pipe
> -g
> > -c tools.c -o tools.o
> > gcc -std=gnu99 -shared -o rJava.so Rglue.o arrayc.o callJNI.o
callback.o
> > fields.o init.o jri_glue.o loader.o otables.o rJava.o tools.o
> > -L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64
> > -L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64/server -ljvm
> > -L/usr/lib/R/lib -lR
> > (cd ../jri && make)
> > make[1]: se ingresa al directorio
> > «/tmp/RtmpCErgmn/R.INSTALL57e71df9a069/rJava/jri»
> > make -C src JRI.jar
> > make[2]: se ingresa al directorio
> > «/tmp/RtmpCErgmn/R.INSTALL57e71df9a069/rJava/jri/src»
> > /usr/bin/javac -target 1.4 -source 1.4 -d . ../Mutex.java
../RBool.java
> > ../RConsoleOutputStream.java ../REXP.java ../RFactor.java
../RList.java
> > ../RMainLoopCallbacks.java ../RVector.java ../Rengine.java
> > ../package-info.java
> > warning: [options] bootstrap class path not set in conjunction with
> -source
> > 1.4
> > 1 warning
> > /usr/bin/javah -d . -classpath . org.rosuda.JRI.Rengine
> > gcc -std=gnu99 -c -o Rengine.o Rengine.c -g -Iinclude
-DRIF_HAS_CSTACK
> > -DRIF_HAS_RSIGHAND -O2 -pipe -g
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include
-I/usr/share/R/include
> > -I/usr/share/R/include
> > gcc -std=gnu99 -c -o jri.o jri.c -g -Iinclude -DRIF_HAS_CSTACK
> > -DRIF_HAS_RSIGHAND -O2 -pipe -g
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include
-I/usr/share/R/include
> > -I/usr/share/R/include
> > gcc -std=gnu99 -c -o Rcallbacks.o Rcallbacks.c -g -Iinclude
> > -DRIF_HAS_CSTACK -DRIF_HAS_RSIGHAND -O2 -pipe -g
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include
-I/usr/share/R/include
> > -I/usr/share/R/include
> > gcc -std=gnu99 -c -o Rinit.o Rinit.c -g -Iinclude -DRIF_HAS_CSTACK
> > -DRIF_HAS_RSIGHAND -O2 -pipe -g
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic
> > -I/usr/share/R/include -I/usr/share/R/include
> > gcc -std=gnu99 -c -o globals.o globals.c -g -Iinclude
-DRIF_HAS_CSTACK
> > -DRIF_HAS_RSIGHAND -O2 -pipe -g
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include
> > gcc -std=gnu99 -c -o rjava.o rjava.c -g -Iinclude -DRIF_HAS_CSTACK
> > -DRIF_HAS_RSIGHAND -O2 -pipe -g
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include -fpic
> > -I/usr/lib/jvm/java-7-openjdk-amd64/jre/../include
> > rjava.c: En la función ‘RJava_init_ctrl’:
> > rjava.c:51:8: aviso: se descarta el valor de devolución de ‘write’, se
> > declaró con el atributo warn_unused_result [-Wunused-result]
> > rjava.c:52:7: aviso: se descarta el valor de devolución de ‘read’, se
> > declaró con el atributo warn_unused_result [-Wunused-result]
> > rjava.c: En la función ‘RJava_request_callback’:
> > rjava.c:39:8: aviso: se descarta el valor de devolución de ‘write’, se
> > declaró con el atributo warn_unused_result [-Wunused-result]
> > rjava.c: En la función ‘RJava_clear_lock’:
> > rjava.c:30:8: aviso: se descarta el valor de devolución de ‘write’, se
> > declaró con el atributo warn_unused_result [-Wunused-result]
> > rjava.c: En la función ‘RJava_request_lock’:
> > rjava.c:22:8: aviso: se descarta el valor de devolución de ‘write’, se
> > declaró con el atributo warn_unused_result [-Wunused-result]
> > gcc -std=gnu99 -o libjri.so Rengine.o jri.o Rcallbacks.o Rinit.o
> globals.o
> > rjava.o -shared -L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64
> > -L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64/server -ljvm
> > -L/usr/lib/R/lib -lR
> > /usr/bin/javac -target 1.4 -source 1.4 -d . ../Mutex.java
../RBool.java
> > ../RConsoleOutputStream.java ../REXP.java ../RFactor.java
../RList.java
> > ../RMainLoopCallbacks.java ../RVector.java ../Rengine.java
> > ../package-info.java
> > warning: [options] bootstrap class path not set in conjunction with
> -source
> > 1.4
> > 1 warning
> > /usr/bin/jar fc JRI.jar org libjri.so
> > make[2]: se sale del directorio
> > «/tmp/RtmpCErgmn/R.INSTALL57e71df9a069/rJava/jri/src»
> > rm -f libjri.so
> > cp src/libjri.so libjri.so
> > /usr/bin/javac -target 1.4 -source 1.4 -classpath src/JRI.jar -d
examples
> > examples/rtest.java
> > warning: [options] bootstrap class path not set in conjunction with
> -source
> > 1.4
> > Note: examples/rtest.java uses or overrides a deprecated API.
> > Note: Recompile with -Xlint:deprecation for details.
> > 1 warning
> > /usr/bin/javac -target 1.4 -source 1.4 -classpath src/JRI.jar -d
examples
> > examples/rtest2.java
> > warning: [options] bootstrap class path not set in conjunction with
> -source
> > 1.4
> > Note: examples/rtest2.java uses or overrides a deprecated API.
> > Note: Recompile with -Xlint:deprecation for details.
> > 1 warning
> > make[1]: se sale del directorio
> > «/tmp/RtmpCErgmn/R.INSTALL57e71df9a069/rJava/jri»
> > installing via ''install.libs.R'' to
> > /home/hermesh/R/x86_64-pc-linux-gnu-library/2.15/rJava
> > ** R
> > ** inst
> > ** preparing package for lazy loading
> > ** help
> > *** installing help indices
> > ** building package indices
> > ** testing if installed package can be loaded
> >
> > * DONE (rJava)
> >
> > The downloaded source packages are in
> > ‘/tmp/RtmpRQzD0x/downloaded_packages’
> >
> > [[alternative HTML version deleted]]
> >
> >
> > _______________________________________________
> > R-help-es mailing list
> > R-help-es@r-project.org
> > https://stat.ethz.ch/mailman/listinfo/r-help-es
> >
>
[[alternative HTML version deleted]]
Javier: Según el salida que envías, el package rJava si se instaló adecuadamente. Sin embargo, lo que señala Carlos J. es importante pues si no configuras R, para usar los libraries de Java instalados en tu distro, vas a tener problemas para poder cargar el package rJava. -- Michael A. Herradora Quesada Sociólogo [[alternative HTML version deleted]]
Hola, Disculpen, quisiera aprovechar el tema [si no es adecuado, por favor háganmelo saber] porque hace tiempo he tenido yo un problema con la instalación de rJava. Yo al intentar instalar obtengo los mensajes siguientes:> install.packages("rJava")Installing package(s) into ‘/home/vate01/R/x86_64-unknown-linux-gnu-library/2.15’ (as ‘lib’ is unspecified) --- Please select a CRAN mirror for use in this session --- Loading Tcl/Tk interface ... done probando la URL ''http://cran.at.r-project.org/src/contrib/rJava_0.9-3.tar.gz '' Content type ''application/x-gzip'' length 537153 bytes (524 Kb) URL abierta =================================================downloaded 524 Kb * installing *source* package ‘rJava’ ... ** package ‘rJava’ successfully unpacked and MD5 sums checked checking for gcc... gcc -std=gnu99 checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc -std=gnu99 accepts -g... yes checking for gcc -std=gnu99 option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -std=gnu99 -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/wait.h that is POSIX.1 compatible... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for string.h... (cached) yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes checking for an ANSI C-conforming const... yes checking whether time.h and sys/time.h may both be included... yes configure: checking whether gcc -std=gnu99 supports static inline... yes checking whether setjmp.h is POSIX.1 compatible... yes checking whether sigsetjmp is declared... yes checking whether siglongjmp is declared... yes checking Java support in R... present: interpreter : ''/usr/bin/java'' archiver : ''/usr/bin/jar'' compiler : ''/usr/bin/javac'' header prep.: ''/usr/bin/javah'' cpp flags : ''-I/usr/lib/jvm/java-7-openjdk/jre/../include -I/usr/lib/jvm/java-7-openjdk/jre/../include/linux'' java libs : ''-L/usr/lib/jvm/java-7-openjdk/jre/lib/amd64 -L/usr/lib/jvm/java-7-openjdk/jre/lib/amd64/server -ljvm'' checking whether JNI programs can be compiled... yes checking JNI data types... configure: error: One or more JNI types differ from the corresponding native type. You may need to use non-standard compiler flags or a different compiler in order to fix this. ERROR: configuration failed for package ‘rJava’ * removing ‘/home/vate01/R/x86_64-unknown-linux-gnu-library/2.15/rJava’ * restoring previous ‘/home/vate01/R/x86_64-unknown-linux-gnu-library/2.15/rJava’ The downloaded source packages are in ‘/tmp/RtmpE2Ykm0/downloaded_packages’ Mensajes de aviso perdidos In install.packages("rJava") : installation of package ‘rJava’ had non-zero exit status>¿Alguien tendrá una idea de cómo solucionarlo? Mil gracias. 2013/2/24 Michael Herradora <mherradora@gmail.com>> Javier: Según el salida que envías, el package rJava si se instaló > adecuadamente. Sin embargo, lo que señala Carlos J. es importante pues si > no configuras R, para usar los libraries de Java instalados en tu distro, > vas a tener problemas para poder cargar el package rJava. > > -- > Michael A. Herradora Quesada > Sociólogo > > [[alternative HTML version deleted]] > > > _______________________________________________ > R-help-es mailing list > R-help-es@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-help-es > >-- «But Gwindor answered: ''The doom lies in yourself, not in your name.''» JRR Tolkien [[alternative HTML version deleted]]
El problema lo tienes en esta linea por lo que veo.
checking JNI data types... configure: error: One or more JNI types differ
from the corresponding native type. You may need to use non-standard
compiler flags or a different compiler in order to fix this.
Mis conocimientos informáticos a tan alto nivel son bajos, pero... ¿Has
probado a instalar los drivers de Oracle? Aquí tienes la guia.
Para el que le pueda servir. En resumen, instalar rJava en linux es:
Paso 1
sudo add-apt-repository ppa:webupd8team/java
Paso 2
sudo apt-get update && sudo apt-get install oracle-java7-installer
Paso 3
sudo R CMD javareconf
Paso 4
install.packages("rJava")
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Hola: El 27/02/13 12:47, Javier Villacampa González escribió:> El problema lo tienes en esta linea por lo que veo. > > > checking JNI data types... configure: error: One or more JNI types differ > from the corresponding native type. You may need to use non-standard > compiler flags or a different compiler in order to fix this. > > > Mis conocimientos informáticos a tan alto nivel son bajos, pero... ¿Has > probado a instalar los drivers de Oracle? Aquí tienes la guia. > > Para el que le pueda servir. En resumen, instalar rJava en linux es: > Paso 1 > sudo add-apt-repository ppa:webupd8team/java > > Paso 2 > sudo apt-get update&& sudo apt-get install oracle-java7-installer > > Paso 3 > sudo R CMD javareconf > > Paso 4 > install.packages("rJava")Me vas a perdonar Javier, pero eso es generalizar mucho. Esos pasos de instalación serán para Ubuntu y derivados, que a nadie que utilice Mageia u OpenSuse, por ejemplo, se le ocurra intentar seguirlos, porque no funcionarán, entre otras cosas porque utilizan paquetes rpm y no deb. Además, me juego lo que quieras a que ese repositorio solo sirve para x86, olvidate de ARM o PowerPC -que es mi caso-. Bueno, de hecho no existe el Java de Oracle para otra cosa que no sea x86. Los de otras arquitecturas nos apañamos con el de IBM o con IcedTea. En cualquier caso, en Debian viene «de serie»: $ busca rjava r-cran-rjava - GNU R low-level interface to Java Perdón, pero tenia que puntualizar. Salud y Revolución. Lobo. -- Libertad es poder elegir en cualquier momento. Ahora yo elijo GNU/Linux, para no atar mis manos con las cadenas del soft propietario. --------- Desde El Ejido, en Almería, usuario registrado Linux #294013 http://www.counter.li.org
Hola amigos. Rescato el hilo para los registros sobre el asunto que tuve con Java. Al actualizar la versión de R a la 2.15.3 el problema se resolvió y no tuve problemas al hacer la actualización del paquete rJava y ninguno de los que de él dependía. Valga señalar que R lo construí desde las fuentes y no desde paquetes precompilados. Supongo que fue un problema al actualizar en algún momento openJDK que desbarató las rutas y que no pude, como es claro, resolver. Saludos. 2013/2/27 Rubén Gómez Antolí <lobo@mucharuina.com>> Hola: > > El 27/02/13 12:47, Javier Villacampa González escribió: > >> El problema lo tienes en esta linea por lo que veo. >> >> >> checking JNI data types... configure: error: One or more JNI types differ >> from the corresponding native type. You may need to use non-standard >> compiler flags or a different compiler in order to fix this. >> >> >> Mis conocimientos informáticos a tan alto nivel son bajos, pero... ¿Has >> probado a instalar los drivers de Oracle? Aquí tienes la guia. >> >> Para el que le pueda servir. En resumen, instalar rJava en linux es: >> Paso 1 >> sudo add-apt-repository ppa:webupd8team/java >> >> Paso 2 >> sudo apt-get update&& sudo apt-get install oracle-java7-installer >> >> >> Paso 3 >> sudo R CMD javareconf >> >> Paso 4 >> install.packages("rJava") >> > > Me vas a perdonar Javier, pero eso es generalizar mucho. Esos pasos de > instalación serán para Ubuntu y derivados, que a nadie que utilice Mageia u > OpenSuse, por ejemplo, se le ocurra intentar seguirlos, porque no > funcionarán, entre otras cosas porque utilizan paquetes rpm y no deb. > > Además, me juego lo que quieras a que ese repositorio solo sirve para x86, > olvidate de ARM o PowerPC -que es mi caso-. Bueno, de hecho no existe el > Java de Oracle para otra cosa que no sea x86. Los de otras arquitecturas > nos apañamos con el de IBM o con IcedTea. > > En cualquier caso, en Debian viene «de serie»: > > $ busca rjava > r-cran-rjava - GNU R low-level interface to Java > > Perdón, pero tenia que puntualizar. > > Salud y Revolución. > > Lobo. > -- > Libertad es poder elegir en cualquier momento. Ahora yo elijo GNU/Linux, > para no atar mis manos con las cadenas del soft propietario. > --------- > Desde El Ejido, en Almería, usuario registrado Linux #294013 > http://www.counter.li.org > > > ______________________________**_________________ > R-help-es mailing list > R-help-es@r-project.org > https://stat.ethz.ch/mailman/**listinfo/r-help-es<https://stat.ethz.ch/mailman/listinfo/r-help-es> >-- «But Gwindor answered: ''The doom lies in yourself, not in your name.''» JRR Tolkien [[alternative HTML version deleted]]