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Søren Højsgaard

2018-Jul-08 08:41 UTC

[R] consider running tools::compactPDF(gs_quality = "ebook")

Dear all,

I run

R CMD build --compact-vignettes="both"  gRbase

and/or

R CMD build --compact-vignettes="gs+qpdf"  gRbase

and in the log from r-devel (on winbuilder) I get

* checking sizes of PDF files under 'inst/doc' ... WARNING
  'gs+qpdf' made some significant size reductions:
     compacted 'gRbase-arrays.pdf' from 421Kb to 115Kb
  consider running tools::compactPDF(gs_quality = "ebook") on these
files

According to "writing R extensions" things should be fine (I have gs
and qpdf on my system):

"The --compact-vignettes option will run tools::compactPDF over the PDF
files in inst/doc (and its subdirectories) to losslessly compress them. This is
not enabled by default (it can be selected by environment variable
_R_BUILD_COMPACT_VIGNETTES_) and needs qpdf (http://qpdf.sourceforge.net/) to be
available. "

Can anyone please tell me what to do?

Best regards
S?ren 

---
> sessionInfo()R version 3.4.4 (2018-03-15)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 16.04.4 LTS

Matrix products: default
BLAS: /usr/lib/libblas/libblas.so.3.6.0
LAPACK: /usr/lib/lapack/liblapack.so.3.6.0

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] Rcpp_0.12.17    shtools_1.0     markdown_0.8    knitr_1.20     
[5] rmarkdown_1.10  devtools_1.13.5

loaded via a namespace (and not attached):
 [1] lattice_0.20-35         digest_0.6.15           withr_2.1.2            
 [4] rprojroot_1.3-2         grid_3.4.4              backports_1.1.2        
 [7] magrittr_1.5            evaluate_0.10.1         stringi_1.2.3          
[10] curl_3.2                RcppArmadillo_0.8.500.0 Matrix_1.2-14          
[13] tools_3.4.4             RcppEigen_0.3.3.4.0     stringr_1.3.1          
[16] compiler_3.4.4          memoise_1.1.0           htmltools_0.3.6

Bert Gunter

2018-Jul-08 14:40 UTC

head link

[R] consider running tools::compactPDF(gs_quality = "ebook")

I believe R-package-devel is the right place to post this, not r-help. See
https://www.r-project.org/mail.html  for details.

Cheers,
Bert



Bert Gunter

"The trouble with having an open mind is that people keep coming along and
sticking things into it."
-- Opus (aka Berkeley Breathed in his "Bloom County" comic strip )

On Sun, Jul 8, 2018 at 1:41 AM, S?ren H?jsgaard <sorenh at math.aau.dk>
wrote:
> Dear all,
>
> I run
>
> R CMD build --compact-vignettes="both"  gRbase
>
> and/or
>
> R CMD build --compact-vignettes="gs+qpdf"  gRbase
>
> and in the log from r-devel (on winbuilder) I get
>
> * checking sizes of PDF files under 'inst/doc' ... WARNING
>   'gs+qpdf' made some significant size reductions:
>      compacted 'gRbase-arrays.pdf' from 421Kb to 115Kb
>   consider running tools::compactPDF(gs_quality = "ebook") on
these files
>
> According to "writing R extensions" things should be fine (I have
gs and
> qpdf on my system):
>
> "The --compact-vignettes option will run tools::compactPDF over the
PDF
> files in inst/doc (and its subdirectories) to losslessly compress them.
> This is not enabled by default (it can be selected by environment variable
> _R_BUILD_COMPACT_VIGNETTES_) and needs qpdf (http://qpdf.sourceforge.net/)
> to be available. "
>
> Can anyone please tell me what to do?
>
> Best regards
> S?ren
>
> ---
>
> > sessionInfo()
> R version 3.4.4 (2018-03-15)
> Platform: x86_64-pc-linux-gnu (64-bit)
> Running under: Ubuntu 16.04.4 LTS
>
> Matrix products: default
> BLAS: /usr/lib/libblas/libblas.so.3.6.0
> LAPACK: /usr/lib/lapack/liblapack.so.3.6.0
>
> locale:
>  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
>  [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8
>  [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8
>  [7] LC_PAPER=en_US.UTF-8       LC_NAME=C
>  [9] LC_ADDRESS=C               LC_TELEPHONE=C
> [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
>
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets  methods   base
>
> other attached packages:
> [1] Rcpp_0.12.17    shtools_1.0     markdown_0.8    knitr_1.20
> [5] rmarkdown_1.10  devtools_1.13.5
>
> loaded via a namespace (and not attached):
>  [1] lattice_0.20-35         digest_0.6.15           withr_2.1.2
>
>  [4] rprojroot_1.3-2         grid_3.4.4              backports_1.1.2
>
>  [7] magrittr_1.5            evaluate_0.10.1         stringi_1.2.3
>
> [10] curl_3.2                RcppArmadillo_0.8.500.0 Matrix_1.2-14
>
> [13] tools_3.4.4             RcppEigen_0.3.3.4.0     stringr_1.3.1
>
> [16] compiler_3.4.4          memoise_1.1.0           htmltools_0.3.6
>
>
> ______________________________________________
> R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/
> posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>
	[[alternative HTML version deleted]]

Søren Højsgaard

2018-Jul-08 15:46 UTC

head link

[Rd] [R] consider running tools::compactPDF(gs_quality = "ebook")

Dear all,

I run

R CMD build --compact-vignettes="both"  gRbase

and/or

R CMD build --compact-vignettes="gs+qpdf"  gRbase

and in the log from r-devel (on winbuilder) I get

* checking sizes of PDF files under 'inst/doc' ... WARNING
  'gs+qpdf' made some significant size reductions:
     compacted 'gRbase-arrays.pdf' from 421Kb to 115Kb
  consider running tools::compactPDF(gs_quality = "ebook") on these
files

According to "writing R extensions" things should be fine (I have gs
and qpdf on my system):

"The --compact-vignettes option will run tools::compactPDF over the PDF
files in inst/doc (and its subdirectories) to losslessly compress them. This is
not enabled by default (it can be selected by environment variable
_R_BUILD_COMPACT_VIGNETTES_) and needs qpdf (http://qpdf.sourceforge.net/) to be
available. "

Can anyone please tell me what to do?

Best regards
S?ren

---
> sessionInfo()R version 3.4.4 (2018-03-15)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 16.04.4 LTS

Matrix products: default
BLAS: /usr/lib/libblas/libblas.so.3.

6.0
LAPACK: /usr/lib/lapack/liblapack.so.3.6.0

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C
 [9] LC_ADDRESS=C               LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

other attached packages:
[1] Rcpp_0.12.17    shtools_1.0     markdown_0.8    knitr_1.20
[5] rmarkdown_1.10  devtools_1.13.5

loaded via a namespace (and not attached):
 [1] lattice_0.20-35         digest_0.6.15           withr_2.1.2
 [4] rprojroot_1.3-2         grid_3.4.4              backports_1.1.2
 [7] magrittr_1.5            evaluate_0.10.1         stringi_1.2.3
[10] curl_3.2                RcppArmadillo_0.8.500.0 Matrix_1.2-14
[13] tools_3.4.4             RcppEigen_0.3.3.4.0     stringr_1.3.1
[16] compiler_3.4.4          memoise_1.1.0           htmltools_0.3.6




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