Korpela Mikko (MML)
2018-Feb-07 13:38 UTC
[Rd] Possible bug in package installation when R_ICU_LOCALE is set
On a Windows computer (other platforms not tested), installing a package from source may fail if the environment variable R_ICU_LOCALE is set, depending on the package and the locale. For example, after setting R_ICU_LOCALE to "fi_FI", install.packages("seriation", type = "source") (package version 1.2-3) fails with the following error: ** preparing package for lazy loading Error in set_criterion_method("dist", "AR_events", criterion_ar_events, : could not find function "set_criterion_method" Error : unable to load R code in package 'seriation' Package "Epi" (version 2.24) fails similarly: ** preparing package for lazy loading Error in eval(exprs[i], envir) : object 'Relevel.default' not found Error : unable to load R code in package 'Epi' Whether R_ICU_LOCALE is set before R is launched or during the session doesn't matter: installation of these two example packages fails either way. If R_ICU_LOCALE is unset, calling icuSetCollate(locale = "fi_FI") is harmless. Browsing through the R manuals, I did not find warnings against using R_ICU_LOCALE, or any indication why package installation should fail with the variable being set. About the collation order of R code files, "Writing R Extensions" says:> The default is to collate according to the 'C' locale.I interpret this (and the surrounding text) as a "promise" to package developers that no matter what the end user does, the developer should be able to rely on the collation order being 'C' unless the developer defines another order.> sessionInfo()R version 3.4.3 Patched (2018-02-03 r74231) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 7 x64 (build 7601) Service Pack 1 Matrix products: default locale: [1] LC_COLLATE=Finnish_Finland.1252 LC_CTYPE=Finnish_Finland.1252 [3] LC_MONETARY=Finnish_Finland.1252 LC_NUMERIC=C [5] LC_TIME=Finnish_Finland.1252 attached base packages: [1] stats graphics grDevices utils datasets methods base loaded via a namespace (and not attached): [1] compiler_3.4.3 tools_3.4.3 -- Mikko Korpela Chief Expert, Valuations National Land Survey of Finland Opastinsilta 12 C, FI-00520 Helsinki, Finland +358 50?462 6082 www.maanmittauslaitos.fi
Ista Zahn
2018-Feb-07 15:04 UTC
[Rd] Possible bug in package installation when R_ICU_LOCALE is set
I can reproduce this on Linux, so it is not Windows-specific.> sessionInfo()R version 3.4.3 (2017-11-30) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Arch Linux Matrix products: default BLAS/LAPACK: /usr/lib/libopenblas_haswellp-r0.2.20.so locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=en_US.UTF-8 [4] LC_COLLATE=en_US.UTF-8 LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 [7] LC_PAPER=en_US.UTF-8 LC_NAME=C LC_ADDRESS=C [10] LC_TELEPHONE=C LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base loaded via a namespace (and not attached): [1] compiler_3.4.3 rmsfact_0.0.3 tools_3.4.3 cowsay_0.5.0 fortunes_1.5-4 On Wed, Feb 7, 2018 at 8:38 AM, Korpela Mikko (MML) <mikko.korpela at maanmittauslaitos.fi> wrote:> On a Windows computer (other platforms not tested), installing a > package from source may fail if the environment variable R_ICU_LOCALE > is set, depending on the package and the locale. > > For example, after setting R_ICU_LOCALE to "fi_FI", > > install.packages("seriation", type = "source") > > (package version 1.2-3) fails with the following error: > > ** preparing package for lazy loading > Error in set_criterion_method("dist", "AR_events", criterion_ar_events, : > could not find function "set_criterion_method" > Error : unable to load R code in package 'seriation' > > Package "Epi" (version 2.24) fails similarly: > > ** preparing package for lazy loading > Error in eval(exprs[i], envir) : object 'Relevel.default' not found > Error : unable to load R code in package 'Epi' > > Whether R_ICU_LOCALE is set before R is launched or during the session > doesn't matter: installation of these two example packages fails > either way. If R_ICU_LOCALE is unset, calling > > icuSetCollate(locale = "fi_FI") > > is harmless. Browsing through the R manuals, I did not find warnings > against using R_ICU_LOCALE, or any indication why package installation > should fail with the variable being set. About the collation order of R > code files, "Writing R Extensions" says: > >> The default is to collate according to the 'C' locale. > > I interpret this (and the surrounding text) as a "promise" to package > developers that no matter what the end user does, the developer should > be able to rely on the collation order being 'C' unless the developer > defines another order. > >> sessionInfo() > R version 3.4.3 Patched (2018-02-03 r74231) > Platform: x86_64-w64-mingw32/x64 (64-bit) > Running under: Windows 7 x64 (build 7601) Service Pack 1 > > Matrix products: default > > locale: > [1] LC_COLLATE=Finnish_Finland.1252 LC_CTYPE=Finnish_Finland.1252 > [3] LC_MONETARY=Finnish_Finland.1252 LC_NUMERIC=C > [5] LC_TIME=Finnish_Finland.1252 > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > loaded via a namespace (and not attached): > [1] compiler_3.4.3 tools_3.4.3 > > -- > Mikko Korpela > Chief Expert, Valuations > National Land Survey of Finland > Opastinsilta 12 C, FI-00520 Helsinki, Finland > +358 50 462 6082 > www.maanmittauslaitos.fi > > ______________________________________________ > R-devel at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel