Dan Tenenbaum
2011-Dec-13 21:58 UTC
[Rd] paste0 bug in install.packages() - leopard installer?
Hello, I get the following:> install.packages("abind", repos="http://cran.fhcrc.org", type="source")trying URL 'http://cran.fhcrc.org/src/contrib/abind_1.4-0.tar.gz' Content type 'application/x-gzip' length 19642 bytes (19 Kb) opened URL =================================================downloaded 19 Kb * installing *source* package 'abind' ... ** package 'abind' successfully unpacked and MD5 sums checked ** R ** preparing package for lazy loading ** help *** installing help indices ** building package indices ... ** testing if installed package can be loaded *** arch - i386 *** arch - ppc Error in paste0("(^|[^%])(%%)*%", spec) : not a BUILTIN function Calls: Sys.setenv -> .expand_R_libs_env_var -> expand -> gsub -> paste0 Execution halted *** arch - x86_64 ERROR: loading failed for 'ppc' * removing '/Library/Frameworks/R.framework/Versions/2.15/Resources/library/abind' The downloaded packages are in '/private/tmp/RtmpiZoTMy/downloaded_packages' Warning message: In install.packages("abind", repos = "http://cran.fhcrc.org", type = "source") : installation of package 'abind' had non-zero exit status This is with a clean install of the R-devel package installer from http://r.research.att.com (sessionInfo() below). It only seems to be triggered by the type="source" flag. I think the problem may be with the installer, as this problem does not occur with the same revision of R-devel built from source on the same machine. Incidentally, this problem doesn't occur with R-devel installed via the installer on a Lion machine but does occur on two different Leopard machines. sessionInfo() R Under development (unstable) (2011-12-12 r57875) Platform: i386-apple-darwin9.8.0/i386 (32-bit) locale: [1] C attached base packages: [1] stats graphics grDevices utils datasets methods base loaded via a namespace (and not attached): [1] tools_2.15.0 Thanks, Dan