Hi all,
I ran in to a problem while trying to install RMAGEML package.
/usr/bin/ld: cannot find -ljava . (please look at the bottom for
details of the error)
I have set the following in ~/.bashrc file.
export JAVA_HOME=/usr/lib/jvm/java-1.6.0-openjdk-1.6.0.0.x86_64
export
LD_LIBRARY_PATH=/home/mamun/R-2.9.0/lib64/R/library/rJava/jri:/home/mamun/R-2.9.0/lib64/R/lib:/usr/lib/jvm/java-1.6.0-openjdk-1.6.0.0.x86_64/jre/lib/amd64:/usr/lib/jvm/java-1.6.0-openjdk-1.6.0.0.x86_64/jre/lib/amd64/native_threads
My system details:
linux version - Fedora 11,
java version - java-1.6.0-openjdk-1.6.0.0.x86_64
R-version - 2.9.0
Any suggestion is welcome.
thanks in advance.
regards,
Mamun
**********************************************
Details of the problem :
**********************************************
rmageml.c: In function updateMAGEML:
rmageml.c:599: warning: cast from pointer to integer of different size
gcc -std=gnu99 -shared -L/usr/local/lib64 -o RMAGEML.so rmageml.o
-L/usr/lib/jvm/java-1.6.0-openjdk-1.6.0.0.x86_64/jre/jre/lib/amd64
-L/usr/lib/jvm/java-1.6.0-openjdk-1.6.0.0.x86_64/jre/jre/lib/i386 -ljava
-L/usr/lib/jvm/java-1.6.0-openjdk-1.6.0.0.x86_64/jre/jre/lib/amd64/server
-L/usr/lib/jvm/java-1.6.0-openjdk-1.6.0.0.x86_64/jre/jre/lib/i386/client
-ljvm
-L/home/mamun/R-2.9.0/lib64/R/lib -lR
/usr/bin/ld: cannot find -ljava
collect2: ld returned 1 exit status
make: *** [RMAGEML.so] Error 1
ERROR: compilation failed for package RMAGEML
* Removing /home/mamun/R-2.9.0/lib64/R/library/RMAGEML
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