Len Zaifman
2007-Jul-17 19:44 UTC
[Rd] Problem building R with Sun Studio Compiler on SLES 9 SP3
In a previous thread I had problems on openSuse 10.2 building R with optimisation and discovered that if I wanted optimisation I need to turn on -fstore -fsimple1 (the first is to force storage on some Fortran routines , the second is to ensure IEEE arithmetic, with some optimisation). That worked for my desktop. The real problem is to work on our servers (Opterons running SLES9SP3) Make works fine but make check fails in base-Ex.R on IO, specifically from base-Ex.Rout.fail:> > if(capabilities("fifo")) {+ zz <- fifo("foo", "w+") + writeLines("abc", zz) + print(readLines(zz)) + close(zz) + unlink("foo") + } Warning in fifo("foo", "w+") : cannot create fifo 'foo', reason 'Input/output error' Error in fifo("foo", "w+") : unable to open connection Execution halted Does anybody know what I need to do to get this fifo capability turned on? -- Len Zaifman Systems Manager, Supercomputing Systems Centre for Computational Biology Hospital for Sick Children Toronto, Ont. M5G 1X8 leonardz at sickkids.ca (416)813-5513