edd at debian.org
2007-May-16 21:16 UTC
[Rd] Bug#424696: R CMD INSTALL -l <path> does not create path (PR#9691)
Soeren, On 16 May 2007 at 23:00, Soeren Sonnenburg wrote: | Package: r-base-core | Version: 2.5.1~20070513-1 [ aka R-patched as of 20070513 ] | Severity: important | | R CMD INSTALL -l /path/to/lib | | no longer creates /path/to/lib but assumes it does already exist. This | is a change in behaviour as it has worked with R 2.4.X Let me pass that on to R Bugs then as it is in no way related to any Debian changes. Thanks, Dirk | looking at /usr/lib/R/bin/INSTALL, the problem seems to be in the block starting at line 298: | | | | lib=`tilde_expand "${lib}"` | if test -z "${lib}"; then | lib=`echo "cat('\n~~~', .libPaths()[1], '\n', sep = '')" | \ | R_DEFAULT_PACKAGES=NULL "${R_EXE}" --no-save --slave | \ | grep '^~~~' | sed 's/.*~~~//'` | message "Installing to library '$lib'" | else | lib0=${lib} | cd ${lib} <-------------- PROBLEM directory must not exist (call MKDIR_P before ?) | lib=`${GETWD}` | cd ${startdir} | fi | | | -- System Information: | Debian Release: lenny/sid | APT prefers stable | APT policy: (700, 'stable'), (650, 'testing'), (600, 'unstable'), (1, 'experimental') | Architecture: i386 (i686) | | Kernel: Linux 2.6.21.1-sonne (SMP w/2 CPU cores; PREEMPT) | Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) | Shell: /bin/sh linked to /bin/dash | | Versions of packages r-base-core depends on: | ii atlas3-base [libblas.so.3 3.6.0-20.6 Automatically Tuned Linear Algebra | ii atlas3-sse2 [libblas.so.3 3.6.0-20.6 Automatically Tuned Linear Algebra | ii libbz2-1.0 1.0.3-6 high-quality block-sorting file co | ii libc6 2.5-7 GNU C Library: Shared libraries | ii libgfortran1 4.1.2-7 Runtime library for GNU Fortran ap | ii libice6 1:1.0.3-2 X11 Inter-Client Exchange library | ii libjpeg62 6b-13 The Independent JPEG Group's JPEG | ii libpaper-utils 1.1.21 Library for handling paper charact | ii libpcre3 6.7-1 Perl 5 Compatible Regular Expressi | ii libpng12-0 1.2.15~beta5-1 PNG library - runtime | ii libreadline5 5.2-2 GNU readline and history libraries | ii libsm6 2:1.0.3-1 X11 Session Management library | ii libx11-6 2:1.0.3-7 X11 client-side library | ii libxt6 1:1.0.5-2 X11 toolkit intrinsics library | ii perl 5.8.8-7 Larry Wall's Practical Extraction | ii refblas3 [libblas.so.3] 1.2-8 Basic Linear Algebra Subroutines 3 | ii tcl8.4 8.4.12-1.1 Tcl (the Tool Command Language) v8 | ii tk8.4 8.4.12-1 Tk toolkit for Tcl and X11, v8.4 - | ii unzip 5.52-9 De-archiver for .zip files | ii zip 2.32-1 Archiver for .zip files | ii zlib1g 1:1.2.3-14 compression library - runtime | | Versions of packages r-base-core recommends: | ii r-base-dev 2.5.1~20070513-1 GNU R installation of auxiliary GN | ii r-recommended 2.5.1~20070513-1 GNU R collection of recommended pa | | -- no debconf information | -- Hell, there are no rules here - we're trying to accomplish something. -- Thomas A. Edison
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