Gavin Simpson
2005-May-04 14:56 UTC
[Rd] make hanging during compile of r-patched/R-devel on Fedora Core 3
Hi, On a new Dell laptop, with a fresh FC3 installation (with latest updates applied) I am experiencing make hanging consistently after/during building grDevices. This happens when using the configure flag --with-lapack (I have the LAPACK rpm distributed with FC3 installed). The last two lines of output are: make[5]: Leaving directory `/home/gavin/R/devel/build/src/library/grDevices/src' make[4]: Leaving directory `/home/gavin/R/devel/build/src/library/grDevices/src' hang here There are no errors or warnings printed to the console. The same thing happens with r-patched. Both source trees were checked out using subversion. If I remove the configure flag for lapack, r-patches and r devel both build fine. I'm not sure where to look for error messages or to diagnose the problem. Has anyone experienced a similar problem? Where should I look for any errors/logs? Any other suggestions? All the best, Gavin -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Gavin Simpson [T] +44 (0)20 7679 5522 ENSIS Research Fellow [F] +44 (0)20 7679 7565 ENSIS Ltd. & ECRC [E] gavin.simpsonATNOSPAMucl.ac.uk UCL Department of Geography [W] http://www.ucl.ac.uk/~ucfagls/cv/ 26 Bedford Way [W] http://www.ucl.ac.uk/~ucfagls/ London. WC1H 0AP. %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%
Marc Schwartz
2005-May-04 17:30 UTC
[Rd] make hanging during compile of r-patched/R-devel on Fedora Core 3
On Wed, 2005-05-04 at 13:56 +0100, Gavin Simpson wrote:> Hi, > > On a new Dell laptop, with a fresh FC3 installation (with latest updates > applied) I am experiencing make hanging consistently after/during > building grDevices. This happens when using the configure flag > --with-lapack (I have the LAPACK rpm distributed with FC3 installed). > The last two lines of output are: > > make[5]: Leaving directory > `/home/gavin/R/devel/build/src/library/grDevices/src' > make[4]: Leaving directory > `/home/gavin/R/devel/build/src/library/grDevices/src' > hang here > > There are no errors or warnings printed to the console. > > The same thing happens with r-patched. Both source trees were checked > out using subversion. > > If I remove the configure flag for lapack, r-patches and r devel both > build fine. I'm not sure where to look for error messages or to diagnose > the problem. Has anyone experienced a similar problem? Where should I > look for any errors/logs? Any other suggestions?Gavin, FWIW, I can duplicate this behavior on my Dell 5150 w/ FC3 using the r- patched tarball from 2005-05-03. I thought that perhaps this might be related to the use of the nVidia proprietary driver, but temporarily going back to the 'nv' driver did not resolve the problem. Thus, I am unable to provide more information as to the etiology of the problem other than to point to some of the references in the r-admin manual starting on page 19 regarding linear algebra. Perhaps there is a problem with the FC3 LAPACK. Best regards, Marc Schwartz