Puppet users - Jul 2014 - puppet master --genconfig generating deprecated features

I'm running a fresh install of 3.6.2 and when I use the config file from 
puppet master --genconfig, there are deprecated settings in there. 
Consequently, running puppet agent -t will throw a bunch of deprecation 
warnings. Shouldn't the --genconfig either not include the deprecated 
configurations or include disable_warnings = deprecations?

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