R devel - Aug 2012 - trouble compiling R-patched from source on Windows 64 bit

Hello!

I'm trying to install R-patched from source on a Windows 64 bit laptop.

I have installed R-tools 2.16 and set up the jpeg, tiff, and libpng files 

Here is the output:

c:\R64\R-patched\src\gnuwin32>make all recommended
make all recommended
make[1]: `MkRules' is up to date.
make[4]: Nothing to be done for `svnonly'.
installing C headers
make[2]: Nothing to be done for `all'.
make[2]: `libRblas.dll.a' is up to date.
make[5]: Nothing to be done for `svnonly'.
installing C headers
make --no-print-directory -C ../extra/intl CFLAGS='-O3 -Wall -pedantic
-mtune=core2' -f Makefile.win
make --no-print-directory -C ../appl CFLAGS='-O3 -Wall -pedantic
-mtune=core2' FFLAGS='-O3 -mtune=core2' -f Makefile.win
make --no-print-directory -C ../nmath CFLAGS='-O3 -Wall -pedantic
-mtune=core2' FFLAGS='-O3 -mtune=core2' -f Makefile.win
make --no-print-directory -C ../main CFLAGS='-O3 -Wall -pedantic
-mtune=core2' FFLAGS='-O3 -mtune=core2'
malloc-DEFS='-DLEA_MALLOC' -f Makefile.win
make --no-print-directory -C ./getline CFLAGS='-O3 -Wall -pedantic
-mtune=core2'
make[4]: `gl.a' is up to date.
make -f Makefile.win makeMakedeps
make -f Makefile.win libpcre.a
make[5]: `libpcre.a' is up to date.
make[4]: Nothing to be done for `all'.
make -f Makefile.win makeMakedeps
make -f Makefile.win libtre.a
make[5]: `libtre.a' is up to date.
make[4]: Nothing to be done for `all'.
make[5]: `stamp' is up to date.
make[5]: `liblzma.a' is up to date.
x86_64-w64-mingw32-gcc -std=gnu99  -shared -s -mwindows -o R.dll R.def console.o
dataentry.o dynload.o edit.o editor.o embeddedR.o extra.o opt.o pager.o
preferences.o psignal.o rhome.o rt_complete.o rui.o run.o shext.o sys-win32.o
system.o dos_wglob.o malloc.o ../main/libmain.a ../appl/libappl.a
../nmath/libnmath.a getline/gl.a ../extra/xdr/libxdr.a ../extra/pcre/libpcre.a
../extra/bzip2/libbz2.a ../extra/intl/libintl.a ../extra/trio/libtrio.a
../extra/tzone/libtz.a ../extra/tre/libtre.a ../extra/xz/liblzma.a dllversion.o 
-L. -lgfortran -lRblas -L../../bin/x64 -lRzlib -lRgraphapp -lRiconv -lcomctl32
-lversion
c:/rtools/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/4.5.2/../../../../x86_64-w64-mingw32/bin/ld.exe:
skipping incompatible ./libRblas.dll.a when searching for -lRblas
c:/rtools/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/4.5.2/../../../../x86_64-w64-mingw32/bin/ld.exe:
skipping incompatible ./libRblas.dll.a when searching for -lRblas
c:/rtools/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/4.5.2/../../../../x86_64-w64-mingw32/bin/ld.exe:
cannot find -lRblas
collect2: ld returned 1 exit status
make[3]: *** [R.dll] Error 1
make[2]: *** [../../bin/x64/R.dll] Error 2
make[1]: *** [rbuild] Error 2
make: *** [all] Error 2

c:\R64\R-patched\src\gnuwin32>

Does this make sense, please?

Thanks in advance for any help.

Sincerely,
Erin



Erin M. Hodgess, PhD
Associate Professor
Department of Computer and Mathematical Sciences
University of Houston - Downtown
mailto: hodgesse@uhd.edu


	[[alternative HTML version deleted]]

On 12/08/2012 19:45, Hodgess, Erin wrote:
> Hello!
>
> I'm trying to install R-patched from source on a Windows 64 bit laptop.
See the comments:
skipping incompatible ./libRblas.dll.a when searching for -lRblas

You are using the wrong compilers: 4.5.2 is not for recent R.
> I have installed R-tools 2.16 and set up the jpeg, tiff, and libpng files
Check your path and the settings in MkRules.local.
> Here is the output:
>
> c:\R64\R-patched\src\gnuwin32>make all recommended
> make all recommended
> make[1]: `MkRules' is up to date.
> make[4]: Nothing to be done for `svnonly'.
> installing C headers
> make[2]: Nothing to be done for `all'.
> make[2]: `libRblas.dll.a' is up to date.
> make[5]: Nothing to be done for `svnonly'.
> installing C headers
> make --no-print-directory -C ../extra/intl CFLAGS='-O3 -Wall -pedantic
-mtune=core2' -f Makefile.win
> make --no-print-directory -C ../appl CFLAGS='-O3 -Wall -pedantic
-mtune=core2' FFLAGS='-O3 -mtune=core2' -f Makefile.win
> make --no-print-directory -C ../nmath CFLAGS='-O3 -Wall -pedantic
-mtune=core2' FFLAGS='-O3 -mtune=core2' -f Makefile.win
> make --no-print-directory -C ../main CFLAGS='-O3 -Wall -pedantic
-mtune=core2' FFLAGS='-O3 -mtune=core2'
malloc-DEFS='-DLEA_MALLOC' -f Makefile.win
> make --no-print-directory -C ./getline CFLAGS='-O3 -Wall -pedantic
-mtune=core2'
> make[4]: `gl.a' is up to date.
> make -f Makefile.win makeMakedeps
> make -f Makefile.win libpcre.a
> make[5]: `libpcre.a' is up to date.
> make[4]: Nothing to be done for `all'.
> make -f Makefile.win makeMakedeps
> make -f Makefile.win libtre.a
> make[5]: `libtre.a' is up to date.
> make[4]: Nothing to be done for `all'.
> make[5]: `stamp' is up to date.
> make[5]: `liblzma.a' is up to date.
> x86_64-w64-mingw32-gcc -std=gnu99  -shared -s -mwindows -o R.dll R.def
console.o dataentry.o dynload.o edit.o editor.o embeddedR.o extra.o opt.o
pager.o preferences.o psignal.o rhome.o rt_complete.o rui.o run.o shext.o
sys-win32.o system.o dos_wglob.o malloc.o ../main/libmain.a ../appl/libappl.a
../nmath/libnmath.a getline/gl.a ../extra/xdr/libxdr.a ../extra/pcre/libpcre.a
../extra/bzip2/libbz2.a ../extra/intl/libintl.a ../extra/trio/libtrio.a
../extra/tzone/libtz.a ../extra/tre/libtre.a ../extra/xz/liblzma.a dllversion.o 
-L. -lgfortran -lRblas -L../../bin/x64 -lRzlib -lRgraphapp -lRiconv -lcomctl32
-lversion
>
c:/rtools/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/4.5.2/../../../../x86_64-w64-mingw32/bin/ld.exe:
skipping incompatible ./libRblas.dll.a when searching for -lRblas
>
c:/rtools/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/4.5.2/../../../../x86_64-w64-mingw32/bin/ld.exe:
skipping incompatible ./libRblas.dll.a when searching for -lRblas
>
c:/rtools/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/4.5.2/../../../../x86_64-w64-mingw32/bin/ld.exe:
cannot find -lRblas
> collect2: ld returned 1 exit status
> make[3]: *** [R.dll] Error 1
> make[2]: *** [../../bin/x64/R.dll] Error 2
> make[1]: *** [rbuild] Error 2
> make: *** [all] Error 2
>
> c:\R64\R-patched\src\gnuwin32>
>
> Does this make sense, please?
>
> Thanks in advance for any help.
>
> Sincerely,
> Erin
>
>
>
> Erin M. Hodgess, PhD
> Associate Professor
> Department of Computer and Mathematical Sciences
> University of Houston - Downtown
> mailto: hodgesse at uhd.edu
>
>
> 	[[alternative HTML version deleted]]
>
> ______________________________________________
> R-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-devel
>

-- 
Brian D. Ripley,                  ripley at stats.ox.ac.uk
Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
University of Oxford,             Tel:  +44 1865 272861 (self)
1 South Parks Road,                     +44 1865 272866 (PA)
Oxford OX1 3TG, UK                Fax:  +44 1865 272595