similar to: Possible Cause of Segmentation Fault

Hi All, Can anyone help me please?I don't know much about segmentation faults.I understand what it is,but why my script's throwing the error i don't know. This is my main function:---- *main<-function()* *{* * dbName<-"xyz_database"* * hostName<-"xyz.com"* * con<-myDbconnect(dbName,hostName) * *

---------- Forwarded message ---------- From: Moumita Das <das.moumita.online@gmail.com> Date: Sat, May 16, 2009 at 2:26 PM Subject: Cannot allocate a new database connection error To: r-help-request@r-project.org Hi friends, why do i keep getting this error?The program runs, twice and every third time i get this error.I have to quit.Again get teh R-prompt and then run the script. *Error

Hi All, Sorry to bother everyone again.Ofcourse Prof Ripley ,Yihui and Uwe had replied to my email.But this segmentation fault error was not solved.I agree with Prof Ripley,as he said my R and all other configurations,are very old.But what i don't understand is ,i was able to run analysis till few days before,and why suddenly this error. *The configuartions i use:---* *R-version * *>

Folks, I failed to create a connection to the database under MySQL DBMS in the R system via RMySQL's method dbConnection(...). My setup is as follows: Microsoft Windows XP 5.1.2600 MySQL 4.1.9 R 2.0.1 DBI 0.1-8 RMySQL 0.5-5 Both of DBI and RMySQL packages were downloaded from bell lab: http://stat.bell-labs.com/RS-DBI/download/index.html My case in R is as follows: > library(DBI)

Dear R users, I would like to query a MySQL database through R. I have installed the latest required packages (RMySQL and DBI) in R (v2.3.1). A MySQL server (v5.0.22) is running on my local machine but I can't initialize MYSQL driver: ------------------------------------------------------------------------------------ > library("RMySQL") Loading required package: DBI >

Hi friends, I have a query regarding na.omit function.Please ,someone help me. I have a function xyz_function<-function(arguments) { some code return(list(matrix=dataset)) } xyz_function_returnvalue<-xyz_function(passed argumentss) *Case-I* xyz_function_returnvalue_deletingNArows<-na.omit((xyz_function_returnvalue)) *Case-II*

Hi everybody, I'm having a problem with connecting to my MySQL database. Each time I try to connect library(RMySQL) m <- dbDriver("MySQL") con <- dbConnect (m, host="my_host",username="my_username", password="my_password", dbname="name_of_db") it says Fehler in mysqlNewConnection(drv, ...) : RS-DBI driver: (could not connect

I don't use MySQL but I have seen messages like this before. They often have replies which indicate that you need to follow the instructions more closely. I suggest you search the list for these previous posts as I'm sure there is help there, somewhere! Tom > -----Original Message----- > From: Adriano von Sydow [mailto:pdasilva at xtra.co.nz] > Sent: Thursday, 10 March 2005 5:13

Hello, A newbie to R. I am trying to use the exonmap package in R. According to the docs, the xmapDatabase() command should read the config file with all the connection parameters and connect to the DB. But i get the error shown below.... > xmapDatabase("Human") Error in mysqlNewConnection(dbDriver(drv), ...) : RS-DBI driver: (could not connect cagadmin at mysql2.cag.chop.edu on

I'm having trouble getting RMySQL to load. I was able to build it and install it (RMySQL_0.5-11.tar.gz). I was also able to build and install mysql-5.0.37. I've read many postings about this but have not found a mention of my particular problem (some closely related). I get the "unable to load shared library, no such file" error, but all the files do exist, RMySQL.so and

Quick question about the configuration files relative to RMySQL (I've tried to get feedback directly from the author David James, but his email address was non-responsive): Documentation at http://cran.r-project.org/doc/packages/RMySQL.pdf on page 3 indicates that for windows machines the only place that the my.cnf file will be looked for is the root (C:\) directory. Is this read correct?

I get the following error trying to connect to a MySQL database: > library(RMySQL) Loading required package: DBI > drv<-dbDriver("MySQL") > con<-dbConnect(drv, user="hothand", password=xxx, host="localhost", dbname="hh03"); Error in mysqlNewConnection(drv, ...) : RS-DBI driver: (could not connect hothand at localhost on dbname

I have a local installation of MySQL on my computer. I enter the following to access MySQL from the command line: /Applications/MAMP/Library/bin/mysql -h localhost -u root -p I am then prompted for a password, and I use: root This connects me to MySQL in the command line. I now want to access MySQL databases in R. I enter the following: mysql <- dbDriver("MySQL") conn <-

Hi All, Wanted to add some more information ,regarding my problem. configuration of teh OS and R:--- Linux 2.6.18-6-686 > R.Version() $platform [1] "i486-pc-linux-gnu" $arch [1] "i486" $os [1] "linux-gnu" $system [1] "i486, linux-gnu" $status [1] "Patched" $major [1] "2" $minor [1] "4.0" $year [1] "2006"

Hi friends, Any idea why do i get this warning?And also why all computed p-values are NaN. Have shown below what i did in Windows r-console.:-- > df c1 c2 1 1 50 2 NA NA 3 4 NA 4 7 6 5 NA 7 6 10 10 > r<-cor(x=df,y=NULL,use="complete.obs",method=c("pearson")) > r c1 c2 c1 1.0000000 -0.9148074 c2 -0.9148074 1.0000000 > cor.p.values<-

Hi all, Can anyone suggest me how to insert rows in between data frames and also keep the ordering of row numbers correct? Estimate Std. Error t value Pr(>|t|) recmeanC2 9.275880e-17 6.322780e-17 1.467057e+00 0.14349903 recmeanC3 1.283534e-17 2.080644e-17 6.168929e-01 0.53781390

Hi friends, Please can anyone help me with an easier solution of doing the below mentioned work. Suppose i have a dataset like this:--- i1 i2 i3 i4 i5 1 7 13 1 2 2 8 14 2 2 3 9 15 3 3 4 10 16 4 4 5 11 17 5 5 6 12 18 6 7 *i1,i2,i3,i4,i5 are my items.I am able to find all possible pairs i.e Say this dataframe is "item_pairs" **i1,i2 **i1,i3 **i1,i4 i1,i5 **i2,i1

I get this error while computing partial correlation. *Error in solve.default(Szz) : system is computationally singular: reciprocal condition number = 4.90109e-18* Why is it?Can anyone give me some idea ,how do i get rid it it? This is the function i use for calculating partial correlation. pcor.mat <- function(x,y,z,method="p",na.rm=T){ x <- c(x) y <- c(y)

Hi All, How do you dynamically generate the arguments for the lm() function when your items vary for each database. Say in my case for a particular database i have items from i1 to i15 . In the code below there a line like this :-- item_cat_fit<-lm(as.numeric(item_item_table$i1) ~ as.numeric(item_item_table$i2) + as.numeric(item_category_table$i3) ) *# this gives proper results,i am

Hi All, Would be grateful,if anyone can answer my queries. I need to share code. For example, if I am working in C/C++, I would put some function declarations in .h files that you would include. In PHP, I would create files with the common functions in them and then "include()" them. So far, I haven't been able to figure out what the standard practice is in R. The two options