similar to: Problem installing RMySQL ("S4R.h:40:17: error: S.h: No such file or directory"?)

Hello, I am trying to compile ROracle _0.5-4 under R 1.9.0 without much success. I am running Windows 2000 SP4, Visual C++ 6.0 SP6, and Oracle client 9.2.0.1.0. I was able to run the pre-compiled version of ROracle_0.5-2 under R 1.7.1, but does not work on R 1.8.1 or R 1.9.0. Here is the output from nmake: C:\Program Files\R\rw1090\library\ROracle\src>nmake Microsoft (R) Program

Hey all, I asked my server administrator to install the RMySQL package for me however he was unable to and received the below errors. I searched the archives for some of the words in the error mesage but found no answers. Does anyone have any ideas what might be going wrong? This is R 1.6.2 on a linux box. Thanks, Fred > install.packages("RMySQL") trying URL

I don't use MySQL but I have seen messages like this before. They often have replies which indicate that you need to follow the instructions more closely. I suggest you search the list for these previous posts as I'm sure there is help there, somewhere! Tom > -----Original Message----- > From: Adriano von Sydow [mailto:pdasilva at xtra.co.nz] > Sent: Thursday, 10 March 2005 5:13

I'm having trouble getting RMySQL to load. I was able to build it and install it (RMySQL_0.5-11.tar.gz). I was also able to build and install mysql-5.0.37. I've read many postings about this but have not found a mention of my particular problem (some closely related). I get the "unable to load shared library, no such file" error, but all the files do exist, RMySQL.so and

Hi, I have some problem to install RMySQL package. Could you help me? I set up the path. [root at ep2 library]# export PKG_CPPFLAGS="-I/var/lib/mysql" [root at ep2 library]# export PKG_LIBS="-L/var/lib/mysql - lmysqlclient" [root at ep2 library]# R CMD INSTALL /home/younko/RMySQL_0.5- 5.tar.gz I got this bunch of error message. Please help me. * Installing *source*

Hi, Can somebody advice on weird mysqlWriteTable bug. > mysqlWriteTable(conn, 'comparison',design2, row.names = F, overwrite=T) Error in mysqlExecStatement(conn, statement, ...) : RS-DBI driver: (could not run statement: You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near '"condition"

Hello, I am trying to compile/Install RMySQL_0.6-0 in R-2.4.1/2.5.0 under Windows XP MCE, I am using MySQL 5.0.41. I have followed the instructions in the file INSTALL.win, but I get some errors... C:\Program Files\R\R-2.4.1>Rcmd build --binary RMySQL --docs=normal * checking for file 'RMySQL/DESCRIPTION' ... OK * preparing 'RMySQL': * checking DESCRIPTION meta-information

Hi all, Unfortunately I must use winXP at my job, so I'm trying install from source RMySQL. Here are some details about this problem: - R 1.7.1 - RMySQL 0.5-2 - mysql 4.1.0-alpha-max-nt I followed the instructions posted in http://www.biostat.jhsph.edu/~kbroman/Rintro/Rwinpack.html and the following messages appeared. BTW, thanks in advance for your help and comments. C:\Program

I have been trying to install RMySQL on Windows 7 following the procedure at: http://biostat.mc.vanderbilt.edu/wiki/Main/RMySQL I think I have properly installed RTools and created a proper Renviron.site file saying: MYSQL_HOME="C:/Program Files/MySQL/MySQL Server 5.5" When I try to install the packages from source, I get warnings that suggest I'm still not quite "with the

Hi, I have problems installing RMySQL under R1.8.1 and RHlinux (kernel2.4.7). During compilation I get: ** libs gcc -I/usr/lib/R/include -I/usr/include/mysql -I/usr/local/include -D__NO_MATH_INLINES -mieee-fp -fPIC -O2 -m486 -fno-strength-reduce -g -c RS-DBI.c -o RS-DBI.o gcc -I/usr/lib/R/include -I/usr/include/mysql -I/usr/local/include -D__NO_MATH_INLINES -mieee-fp -fPIC -O2 -m486

I have a mysql database I installed on my Ubuntu server, and I'm trying to figure out how to access and analyze it from a Win XP machine running R 2.15.1. I thought that RMySQL was the way to go. (Is there an easier way?) I tried to follow the instructions at http://www.r-bloggers.com/installing-the-rmysql-package-on-windows-7/ so I installed mysql-installer-community-5.5.27.0.msi, then set

Folks, I failed to create a connection to the database under MySQL DBMS in the R system via RMySQL's method dbConnection(...). My setup is as follows: Microsoft Windows XP 5.1.2600 MySQL 4.1.9 R 2.0.1 DBI 0.1-8 RMySQL 0.5-5 Both of DBI and RMySQL packages were downloaded from bell lab: http://stat.bell-labs.com/RS-DBI/download/index.html My case in R is as follows: > library(DBI)

I am installing RMySQL_0.9-3.tar.gz pkg on windows-7 64 bit machine as:--- C:\Users\trendwise> R CMD INSTALL --configure-args='--with-mysql-inc="C:\\Program Files\\MySQL\\MySQL Server 5.5\\include"' "C:\\Users\\trendwise\\Downloads\\RMySQL_0.9-3.tar.gz" * installing to library 'C:/Users/trendwise/Documents/R/win-library/2.14' * installing *source* package

Hi, i try to install, but getting no success. What this mean cannot find -lz , any necessary lib left in my SuSE Installation? Many thanks, Christian linux:/usr/lib/R/bin # R CMD INSTALL RMySQL_0.5-2.tar.gz * Installing *source* package 'RMySQL' ... creating cache ./config.cache checking how to run the C preprocessor... cc -E checking for mysql_init in -lmysqlclient... yes checking

Hi, On a Win7 64 bit, I have installed: *R-15.0 and I am running it in 64bits *Rtools215.exe*MySQL 5.5.23 64bits My PATH start with D:\BenSave\Rtools\bin;D:\BenSave\Rtools\MinGW64\bin;D:\BenSave\R\R-2.15.0\bin;D:\BenSave\Rtools\MinGW\bin;D:\BenSave\Rtools\gcc-4.6.3\bin; Note that I place MinGW64\bin has I want the package in 64 bits, so just in case it helps... To install RMySQL 64 bits, I

Hi! I am trying to install the RMySQL package. The installation stops with the following error message. path to mysql is set. setenv PKG_CPPFLAGS /home/arabidopsis/software/R1.9.1/linux/mysql/include setenv PKG_LIBS /home/arabidopsis/software/R1.9.1/linux/mysql/lib R CMD INSTALL RMySQL_0.5-5.tar.gz #....cut cut. creating src/Makevars ** libs gcc

Hello, I am having problems installing RSQLite under FC8. The error message seems to indicate Rversion.h and Rconfig.h are missing. To illustrate the problem, I have copied below the output shown when I first install R (binary distribution) and then try to install RSQLite. Because the problem does not occur when installing RSQLite with R under Windows I suspect the problem is perhaps due to my

Hello: What do I need to do to compile R packages (especially RMySQL) for the 64-bit version of R 2.12.0 under Vista_x64? I upgraded to "Rtools212.exe" yesterday but immediately got errors from "R CMD check RMySQL_0.7-5.tar.gz". After the first error, I installed it a second time, then got "undefined reference to" roughly 50 different names beginning

I am having trouble installing RMySQL on a clean install of Fedora Core 4 64 bit on a dual dual core machine (that is, two dual core processors). Seems like the LD_LIBRARY_PATH is incorrect, but I don't seem to have it quite right yet. There are a few mentions of this problem in google, but thus far none of the "fixes" and fixed my problem. I've tried defining the

Hello, I'm tearing my hair out over this. Any help will be very much appreciated. It's been two long nights battling with RMySQL. > library(RMySQL) Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library "/usr/local/lib/R/library/RMySQL/libs/RMySQL.so": dlcompat: dyld: /usr/local/lib/R/bin/R.bin Undefined symbols: _getopt_long