similar to: Problems with Rcmdr and BiodiversityR

I have installed R on windows 7 machine. In the install packages I can't find BiodiversityR package. I was wondering if I can get some help with the installation process. Thanks. -- View this message in context: http://r.789695.n4.nabble.com/installation-of-BiodiversityR-package-tp3816807p3816807.html Sent from the R help mailing list archive at Nabble.com.

Dear List! I installed R and quite a few packages I use. When I try to start BiodiversityR the library loads without any problems but GUI do not start. Rcmdr loads without any problems. I am using R 2.13.0 64 bit. Downgrade to R 2.12.2 works. Thanks, Janos

Estimados, Soy usuario de Mac y desde que instale la nueva version de R y Rstudio, no puedo cargar el paquete Rcmdr. Lo miso me pasa con el paquete BiodiversityR. Alguien tiene alguna posible solución? Desde ya muchas gracias. Saludos, Luis > library(Rcmdr) Loading required package: RcmdrMisc Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :

Dear Gabor You got solution for your problem? "I have just got a laptop with win 7 64 bit installed on it. I installed R and quite a few packages I use. When I try to start BiodiversityR the library loads without any problems but when starting the GUI it gives me the following error message: Sourced: BiodiversityGUI.R Error : .onAttach failed in attachNamespace() for 'Rcmdr',

Sourced: BiodiversityGUI.R Error : .onAttach failed in attachNamespace() for 'Rcmdr', details: call: get(Menus[m, 5]) error: object 'chisquareDistributionPlot' not found Error in BiodiversityRGUI() : needs Rcmdr Hi Guys, I am from China, I wanna use Biodiversity R, but it can't work. Can somebody help me? Thanks -- View this message in context:

Gracias Carlos, ya intente instalar varias veces el paquete data.table, pero no se porque no lo puede instalar Aqui mando la salida: > install.packages("data.table") There is a binary version available but the source version is later: binary source needs_compilation data.table 1.10.0 1.10.4 TRUE Do you want to install from sources the package which

Hello, I having trouble running the CAPdiscrim function located in biodiversityR. My data tables are as follows: community data frame (called "spdata") Species1... Speciesn site1.. site2.. siten with abundance data as values. Site names are row names. and environmental data (called "envdata") year elevation site1... site2... siten my command

Hi, I get the following error when trying to load the BiodiversityR package > library(> library(BiodiversityR) Loading required package: tcltk tcltk DLL is linked to '/opt/X11/lib/libX11.6.dylib' Error: package or namespace load failed for ?tcltk?: .onLoad failed in loadNamespace() for 'tcltk', details: call: fun(libname, pkgname) error: X11 library is missing: install

Estimados, Muchas gracias por sua ayuda, ya pude instalar data.table y esta funcionando. Respecto al paquete biodiversityR, no se porque ahora no me corre. El script esta correcto, pero no se porque me tira error. > fase<-diversitycomp(biobsp, y=biopcat,factor1="Fase",index="richness",method=?s") Error in diversitycomp(biobsp, y = biopcat, factor1 =

Hi all: I am trying to use the BiodiversityR package in Rcommander since I need to box-cox transform some data. However, even when trying with the example files, I get this error just after selecting the box cox transformation in the Menu, and Rcommander and Rstudio just shut down. What is it? What could I do? Thanks a lot The instruction at "0x00000001" referenced memory at

I am getting the error message: > library(Rcmdr) Loading required package: car Loading required package: MASS Loading required package: nnet Error : .onAttach failed in attachNamespace() for 'Rcmdr', details: call: structure(.External("dotTclObjv", objv, PACKAGE = "tcltk"), class = "tclObj") error: [tcl] invalid command name "image".

Hi, First I should note I am relatively new to R so I would appreciate answers that take this into account. I am trying to perform an MDS ordination using the function ?metaMDS? of the ?vegan? package. I want to ordinate species according to a set of functional traits. ?Species? here refers to ?sites? in traditional vegetation analyses while ?traits? here correspond to ?species? in such

Greetings dear friends. Please, I really find problems having the program read my datasets (here attached). Have converted datasets to csv, imported but always not reaching the target. Would be very happy if some one out can help me on time. Thanks Ndoh Mbue Innocent International corporation office China University of Geosciences 388 Lumo road 430074, Wuhan-China Tel: 0086 27 67885947/0086

Dear List, today I turn to you with a next problem. I'm trying to compare species richness between various datasets (locations) using species accumulation curves (Chapter 4, page 54 in Tree diversity analysis<http://www.worldagroforestry.org/treesandmarkets/tree_diversity_analysis.asp>by Kindt & Coe). To accomplish this I'm using package BiodiversityR. My data is comprised of

Hola amigos: Quisiera saber si alguna opción en R del software primer para análisis de datos multivariantes en ecología Gracias Javier [[alternative HTML version deleted]]

Hi all Does anyone know if there are any R packages available for creating UML class and object diagrams in R (suitable for use with Latex)? I'm considering developing such a system... Note, I'm aware there are Latex packages (so no one needs to state the obvious). On a side issue I'm thinking about (mostly) abandoning the class system I mentioned earlier. Thank you to Martin

Hi, I would like to calculate the RELATIVE euclidean distance. Is there a function in R which does it ? (I calculated the abundance of 94 chemical compounds in secretion of several individuals, and I would like to have the chemical distance between 2 individuals as expressed by the relative euclidean distance. Some compounds are in very low abundance whereas others are in high abundance,

Dear colleagues. I wonder if anybody knows about a procedure in R to calculate the Berger-Parker index and the Brillouin Diversity index. I searched the net but did not find anything good about it. Thanks a lot for any help Mayo, Elvira. [[alternative HTML version deleted]]

Hello, I'm trying plot points in an NMDS according to a factor with two levels: fig<-ordiplot(canod.sol, type="none",cex.axis=0.9,cex.lab=0.1,pty="m",tck=-0.01) ordisymbol(fig, y = hab, factor = "habitat", rainbow = T,col = env, legend = F) This gets me part of the way - It produces a plot with blue triangles for the first factor level and red circles

Hello! I'm a PhD student working with coral reef fish diversity in Mexico. I want to do species accumulation curves but I have differential sampling effort for each "sample". Do you know or have developed an R script that consider the differential effort of each sample? PRIMER and other programs use each pack of species as a replica without the possibility of telling the program that