similar to: gridBase and layout

Dear All, I ma having a trouble in generating a figure containing 3 insets with the gridBase package. I always get an error message of the kind: Error in gridPLT() : Figure region too small and/or viewport too large No matter which parameters I choose. The plots works nicely with two insets only, but when I try adding the third one, my troubles begin. I am probably doing something wrong in the

Hi, I am trying to create a plot with pairs() using a gplot.hexbin() for each pair. For pairs I can provide a custom upperPanel function: pairs(iris[1:4], panel=mypanel) and mypanel() calls plot.hexbin(): library(hexbin) # Bioconductor mypanel <- function(x, ...){ hb <- hexbin(x) plot(hb) } The problem is that gplot.hexbin() is based on the

Hello, I'm trying to follow the documentation of how to use gridBase, and I've reached the minimal code example below as my best effort. Can someone explain how to keep the column of boxplots on the same page as the rectangles (even though I've tried new = TRUE) ? Also, would it be hard / possible to match up the middle of each boxplot to the middle of each rectangle ?

I am setting up base plots -- one in viewport A and and one in B. This part works fine. But if I go back to A after having done B and add horizontal lines it seems to not use the correct coordinates. How do I tell it to resume using A's coordinates? I am already using par(fig = gridFIG()) but it seems that that's not enough to reestablish them. What happens is that when I go back to

I am setting up base plots -- one in viewport A and and one in B. This part works fine. But if I go back to A after having done B and add horizontal lines it seems to not use the correct coordinates. How do I tell it to resume using A's coordinates? I am already using par(fig = gridFIG()) but it seems that that's not enough to reestablish them. What happens is that when I go back to

All, I have a simple plot(x,y) and I would like to then insert rectangles of some length (in native coordinates) and height fixed to 0.5 in native coordinates. I can't quite get the code right to do this. Can anyone give me a quick example of how to do this? I looked the gridBase index and the tutorial (from R-news?) but just haven't gotten it down yet. > plot(1:10,1:10)

Hello, I am having trouble adding symbols to grid graphics. I am able to create a lattice scatterplot using xyplot, which has a range from -15:15 in both the X and Y directions. However, when I try to add circles and text to this graph using grid.circle() and grid.text(), they are offset using the default npc coordinates. Nothing happens when I pass the parameter default.units="native"

Hi all -- So I'm trying to use lattice graphics, but I want to use a sunflower plot, which doesn't seem to be part of lattice. No problem, I put together the following code, which mostly works -- *except* for the first graph it generates. If it opens the graphic device, then it draws the xygrid, clears the device, then draws the sunflowerplot. All subsequent output operations work

I would like to use gridBase to place four separate heatmaps (actually, a stripped-down heatmap.2 from ght gregmisc package that contains only the "image" part) into four different viewports. I can get the placement correct, but I keep 'losing' the previous plot. Any suggestions? Here is some quick example code trying to put a heatmap into the left viewport and then

Hello all, I'm trying to write a function using the gridBase package. I'd like to push several base subplots to a larger plot constructed with grid. However, I'm having trouble getting consistent results when running the function when the plotting window (quartz) is closed, when it is left open and the plot function is repeated to the same window, and when the output is saved to a

Dear grid-expeRts, The goal: I would like to construct a plot (matrix) with grid and gridBase, which consists of four "sub-plots". The sub-plots should have a square plotting region as one would force with par(pty="s") in base graphics. The problem: I don't get a square plotting region, not even by specifying pty="s" in par(). Indeed, if you display the grid

Hi, Why does the upper left panel (in the plot below) not have a gray background? Cheers, Marius require(grid) require(gridBase) pdf(file="Rplot.pdf", width=8, height=8, onefile=FALSE) ## set up the grid layout gl <- grid.layout(5, 5, widths=unit(c(1.8, 8, 0.8, 8, 0.8), "cm"), heights=unit(c(0.8, 8, 0.8, 8, 1.5), "cm")) if(FALSE) grid.show.layout(gl)

Hi everyone. I want to solve the following problem. I have a data.frame and I create a dotplot using lattice. Then I want to use the grid-package to create a combined graphic which contains the dotplot as well as a textplot() (using package gplots) of the data.frame next to the dotplot. Example code: library(lattice) library(grid) library(gplots) xx <- data.frame(f=factor(rep(1:5, each=5)),

Dear all, I have a simple plot using "gridBase" like this. The problem occurs whenever I execute this code there is always a blank page created before the actual plot. How can we disable that blank page? I am using: R version 2.7.2 (2008-08-25) and gridBase version: 0.4-3 __ BEGIN__ library(grid) library(gridBase) opar <- par(no.readonly=TRUE) par(opar) grid.newpage()

Hi, I want to do the following: 1) create a trellis plot with 1 x 1 layout 2) add a key in the upper right hand corner of the plotting region (i.e., the panel), but after the initial call to trellis 3) resize the resulting device graphics device without changing the relative position of the key For instance, the code below draws the key relative to the device window--not the plotting area.

System info: Red Hat 9.0 R Version 1.8.0 ESS 5.1.21 Emacs 21.2.1 ------------------- Hello I've been working with Paul Murrell here in New Zealand to develop plots of temperature and density profiles at 22 stations spanning a frontal zxone, and then overlaying the isothermal and mixed layer depths (similar to Kara et al. 2003 JGR Oceans 108(C3) pg. 24-5, figure 2). Paul Murrell has a

I have recently converted from S-Plus (Dec Alpha) to R (Mandrake 10.0). The differences are subtle but in some cases not easily converted. My Splus Command plotting deck was over 1200 lines and R has simplified this down to 900 lines so far. I do a lot of mapping with polygons and I am trying to figure out how to increase the default size of the fill boxes in the legend call. Splus had a

Hi again! I put this question in another topics post before but I fear it might drown there. Is it possible to have transparent / alpha blended colors for pie charts? I am using the pies in a map of pies and those pies are sometimes overlapping so it would be great to see if another pie lies beneath. Thanks, Werner

I am running R 2.2.1 on a University-supported linux installation based on Redhat EL3. I am sorry that it did not occur to me to mention this before; I updated R very recently, with the most recent version available for EL3 at http://cran.cnr.berkeley.edu/bin/linux/redhat/el3/. Looking at the gridBase documentation, I find that 2.2.1 is not in fact the most recent version. I have now spent

Hello, I am currently trying to show the abundance of two species of zooplankton within the North Sea as pie chart bubble plots. I followed Werner Wernersen's advice in R help (http://finzi.psych.upenn.edu/R/Rhelp02a/archive/48644.html) and used Paul Murrell's paper "Integrating Grid Graphics Output with Base Graphics Output" (in R News) to try and do this (using the gridBase