similar to: Tinn-R Install

Is there any way to change the orientation of the labels on the end of the dendrograms to horizontal rather than vertical? If so, how can I do that. _____________________________________________ Patrick Richardson Biostatistician - Program of Translational Medicine Van Andel Research Institute - Webb Lab 333 Bostwick Avenue NE Grand Rapids, MI 49503 ph. 616.234.5787 This email message,

List, Is there any way to specify the position of the legend from within the following code? If so, how can I do it. As it stands it in the bottom left corner and I want to move it to the top right. I'm not sure if I can use the default "plot" or if I need to go with the lattice package. Suggestions much appreciated. plot(y, xlab="Survival Time (Months)",

Good morning. My client currently has Windows 2000 and Office 2000. They are planning to upgrade to Windows XP/Vista/Office 2007. Some computers have R installed. I don't have a version number. I'm working off of a spreadsheet. Please respond to the following questions at your earliest convenience: 1) What versions, if any, of R are compatible with XP? If no compatible version

ExpeRts, I'm trying to compare three survival curves using the function "survdiff" in the survival package. Following is my code and corresponding error message. > survdiff(Surv(st_months, status) ~ strata(BOR), data=mydata) Error in survdiff(Surv(st_months, status) ~ strata(BOR), data = mydata) : No groups to test When I check the "strata" of the variable. I get .

The problem mentioned in the 06 Dec 2010 email below still occurs with Tinn-R (v.2.3.7.1) when highlighting a string of code, copying to the clipboard, and trying to send to Rgui via Shift+Ctrl+Q. I can copy 1 line of code to the clipboard and send it to Rgui with Shift+CTRL+Q. This fails with 2 or more lines of code, generating the error: Error in source(.trPaths[5], echo = TRUE,

I have just installed the latest versions of R and Tinn-R (running Windows XP prof.) R 2.11.0 Tinn-R version 2.3.5.2 Everything seems fine, except for the following: I usually do this: Open Tinn-R and click on the R icon to open R - this splits the screen into two parts horiozontally, with Tinn-R on top and R in the bottom window. My problem is simply this: By highlighting one line, and click the

I installed the newest version of R and once again ran into problem with Tinn-R failing when trying to use the R explorer. I had this problem once before and solved it when I added the following .trPaths = c( 'C:/Documents and Settings/fbuchins/Application Data/Tinn-R/tmp/', 'C:/Documents and Settings/fbuchins/Application Data/Tinn-R/tmp/search.txt', 'C:/Documents and

Geneset_name #Chromosome #Hit_in_Biomart original_geneset_len Missing.genes [1,] "AGUIRRE_PANCREAS_CHR12" "1" "51" "59" "8" [3,] "AGUIRRE_PANCREAS_CHR9" "1" "24" "24"

Hi, I just got a new computer with windows vista on it and I am having a problem using Tinn R. The problem occurs when I select a chunk of code and try to run it all at once using the "R send:selection (echo = TRUE)" button, I get this error: Error in source(.trPaths[5], echo = TRUE, max.deparse.length = 150) : object ".trPaths" not found Any suggestions how to fix this??

Dear ALL, I am trying to run Tinn R for the first time with R. I have already selected the SDI option. When ever I run the code I get the following error: > source(.trPaths[4]) Error in source(.trPaths[4]) : object '.trPaths' not found Can any one help? Raphael

I know this has been addressed before, but I'm still confused by the solution. When running TINN - R (ver 2.1.1.6) with R (2.8.0) I have lost the functionality of TINN-R It returns an error source(.trPaths[5], echo=TRUE, max.deparse.length=150) I modified the RProfile.site file as follows: options(pager="interal") .trPaths=c( 'C:/Documents and

I have upgraded everything lately and can no longer get the Tinn-R explorer to work. I think I have had this problem before but cannot recall how I solved it.I run Tinn-R 2.0.0.7 and Rgui version 2.7.2 When I click on the explorer button I get > trObjList(envir='.GlobalEnv', pattern='', group='', path=.trPaths[3]) Error in trObjList(envir = ".GlobalEnv",

Dear r-users,   Actually, this is not a big problem, however it is a bit annoying.  Everytime I want to use Tinn-R and R. I have to do this step first before I can excute a set of R codes:   R--> configure --> temporarily (current session)   if not it will give this message:   > .trPaths <- paste(paste(Sys.getenv('APPDATA'), '\\Tinn-R\\tmp\\', sep=''),

I have been using Tinn-R with R without any problems but when I try to use it with REvolution R I get the following error message when Tinn-R runs the configuration script and gets to the trDDEInstall() function: ## Start DDE trDDEInstall() > trDDEInstall() Error in structure(.External("dotTcl", ..., PACKAGE = "tcltk"), class = "tclObj") : [tcl] invalid command

Hello All, I am using Tinn-R (v 2.0.0.7) integrated with R (v 2.7.2) on a 32-bit Windows Vista system. When I try to run a code and send it to R from Tinn-R, I get the following error message; ?Error in source(.trPaths[5], echo = T) : object ".trPaths" not found? I was using an earlier version of Tinn-R and R and I was not having problems till recently when R-sending started freezing

I am trying to send complete R code to R from Tinn R by pressing R send:contiguous button. I get following error: > source(.trPaths[5], echo=TRUE, max.deparse.length=150) Error in source(.trPaths[5], echo = TRUE, max.deparse.length = 150) : object '.trPaths' not found Anyone has any idea? Thanks in advance RD -- View this message in context:

I am running an R script with Tinn-R (2.2.0.1) and I get the error message Error in source(.trPaths[4], echo = TRUE, max.deparse.length = 150) : object ".trPaths" not found Any solutions? Thank you. Kevin

Hi, I'm working on windows 7.  Recently I install the latest R and also use together with Tinn-R but it is not working well.  I got the following message.  I have tried saving the Rprofile as suggested by the R forum, but still it is not running.  What should I do? > source(.trPaths[5], echo=TRUE, max.deparse.length=150) Error in source(.trPaths[5], echo = TRUE, max.deparse.length =

Hi R-users,   I wrote a code to evaluate double sum as follows:   ff2 <- function(bb,eta,z,k) { r <- length(z) for (i in 1:r) { sm1 <- sum((z[i]*bb/2)*(psigamma((0:k)+eta+1,deriv=0)/(factorial(0:k)*gamma((0:k)+eta+1))))  sm2 <- sum((besselI(z[i]*bb,eta)*log(z[i]*bb/2) - sm1)/besselI(z[i]*bb,eta))  sm2 } ff2(bb,eta,z,10)     but it gave me the following message:   >

Hi, First: sorry for my bad English! I have received several emails reporting problems using Tinn-R with the new R version (2.11.0). This email is meant to assist the users. This problem is new and is related with R 2.11.0 and Hmisc package for Windows! After download and install R 2.11.0pat under Linux and Windows, see below my results: a) Under Linux (Open SUSE 11.3) - I found no problem