similar to: bugs.seed= and summary.only= option in R2WinBUGS

Hi All Does anyone know if I can avoid to use the write.model() function below? I dont want to do this. Can't bugs() do that automatically for me just by specifying the 4th argument 'model'? Just I like I am also using the 'inits' object! If I use 'model' in the same way as I use 'inits' I am getting the error: > sim <- bugs(data, inits, parameters,

I'm back! I've just learned that, on a fully updated Fedora Core Linux5 sytem, the working solution to access Winbugs under wine via the R package "rbugs" no longer works. Here was my last post on this topic (with the formerly working solution) from January. http://finzi.psych.upenn.edu/R/Rhelp02a/archive/68497.html Currently, what happens is that WinBUGS starts up, but just

Dear all, I had trouble in setting up WinBUGS on my Mac, and I'm seeking for some help here. I followed the instruction by Tom Palmer here: http://www.ruudwetzels.com/MacBUGS/winbugsonmacosx.pdf I installed Darwine 1.1.21, and downloaded WinBUGS14. However, when I double-clicked the WinBUGS14.exe file, a black-box dialog window poped up, and I got error message in the Wine log as

Dear R-users, I am trying to use the following code to reproduce results from Prof. Gelman's book, but have the listed error for R2WinBUGS version (the openbugs version is good). I am using R-2.6.1 on windows XP, and all the R packages are most current ones. schools.bug can be found at http://www.stat.columbia.edu/~gelman/bugsR/runningbugs.html . Can anyone help me to figure out what's

Hi, I??m trying to use the Win2BUGS package from R and I have a similar problem that reurns with the message: Error in FUN(X[[1]], ...) : symbol print-name too long But, there is no stray ` character in the file ( Sugestions given by: Duncan Temple Lang <duncan> Date: Mon, 26 Sep 2005 07:31:08 -0700 ) The progam in R is: library(R2WinBUGS) library(rbugs) dat <-

Dear all, I tried to run WinBUGS model in R by using package R2WinBUGS, but I failed because of the massage : cannot calculate DIC for model in log file of WinBUGS14. In fact, the model works in WinBUGS and I can get summaries of the model, such as density, stats..., except DIC , because DIC may not be appropriate in this kind of model due to some reasons(according to the manual of WinBUGS14),

Dear UseRs, Apologies, I tried to post to the list yeasterday, but (for some reason) part of my message got missed off. Here's a second attempt. I am having some problems using R with WinBUGS using the R2WinBUGS package. Specifically, when I try to run bugs() I get the following message. Error in FUN(X[[1L]], ...) : .C(..): 'type' must be "real" for this format To

I am trying to run WinBUGS 1.4 from the Ubuntu 6.10 Linux distribution. I am using the R2WinBUGS packages with the source file listed below. WinBUGS appears to run properly, but I get the following message after WinBUGS starts in WINE. Does anyone know what may be causing this error and what the correction may be? Thanks ERROR MESSAGE: fixme:ole:GetHGlobalFromILockBytes cbSize is 13824

Dear R users: I was trying to fit a HMM with mixture of Gaussian into the dataset, and I tried to implement it by R2Winbugs. But I got the following errer. * Error in FUN(X[[1L]], ...) : .C(..): 'type' must be "real" for this format* Does anybody know what's the problem? Does R2Winbugs accept some matrix as inits? I would really appreciate your help. Thank you very much.

Hi R-Help! I am trying to use R2WinBUGS but I get the following error message in WinBUGS (and there must be something wrong with my R statement as I tried it directly in WinBUGS and it worked): display(log) check(C:/Documents and Settings/Daikon/Roche/pop_model.txt) model is syntactically correct data(C:/Documents and Settings/Daikon/Roche/data.txt) expected key word structure compile(7) ...(and

R2WinBUGS users, I'm getting the error message "monitor could not be set" when I try to monitor (and output to R) a response variable that includes missing data (NAs)...ie.e imputing for y. Setting monitors for other parameters works OK and running the R-generated WinBUGS script file in WinBUGS, also works OK. Below is my R code and the log.txt file output by R2WinBUGS. As I want to

Dear, I am running the following R code using the R2WINBUGS package. fit<-bugs( model.file=BUGScode, data=data, inits = list(geninits1,geninits2), parameters.to.save=keepers, n.chains=nchains, n.iter=runs, n.burnin=burn, n.thin=nthin, bugs.directory="C:/Program Files/WinBUGS14" ) I put this code and the corresponding WINBUGS code "BUGScode" in the same folder

Dear R users, I've found bugs.R : the functions for running WinBUGs from R that is writen by Dr. Andrew Gelman who is a professor from Columbia University. The bugs.R would be very useful for me, and I think many of you know it as well. I followed the instuctions on Dr. Gelman's web to install all of documents that bugs.R needs, but when I try to run the school example the web posted in

*Dear R-user, * I try to run Winbugs from R using bugs function in R2WinBUGS.My model works well in Winbugs except that I can't get DIC. Since I don't need DIC, when I try to run Winbugs from R , I set "DIC=FALSE". My model is as following: model { for (i in 1:N) { for(j in 1 : T ) { x[i, j] ~ dbin(p[i, j],n[i]) #Hier.prior p[i, j] ~ dbeta(alpha[i, j], beta[i, j]) alpha[i, j]

Dear R-help, I'm using the R2WinBUGS package and getting an error message: Error in file(file, "r") : unable to open connection In addition: Warning message: cannot open file 'codaIndex.txt', reason 'No such file or directory' I'm using R 2.2.1 and WinBUGS 1.4.1 on a windows machine (XP). My R code and WinBUGS code is given below.

Hello R and BUGS users, I am writing a heirarchical model in R to send to BUGS via R2WinBUGS and I am finding it difficult to get the model to run. I seem to be having two problems. 1) I can't seem to send variables classed as factors (Month), is there a way do this? 2) Checking the Log in WinBUGS I can see that the model is Syntactically correct, but Bugs is not able to recognise the the

Dear all I used R2WinBUGS package's bugs() function to generate MCMC results. Then I tried to save the simulation draws in R, using read.bugs() function. Here is a simple test: ###################### library(coda) library(R2WinBUGS) #fake some data to test beta0=1 beta1=1.5 beta2=-1 beta3=2 N=200 x1=rnorm(N, mean=0,sd=1) x2=rnorm(N, mean=0,sd=1) x3=rnorm(N, mean=0,sd=1) lambda2= exp(beta0+

Dear all, I'm having a slight issue with R2WinBugs.... it cannot detect where WinBUGS is located. Q: How can I change the default path? Any advice is greatly appreciated. Thanks. Regards Erica I'm using R2WinBUGs (R version 2.21.1) on windows platform (Windows 7). I have downloaded WinBUGS14.exe and patch 1.4.3. As i'm working with Windows 7 (similiar issues to Vista occur),

Hi! I am new to BUGS and running BUGS from R. I am trying to run a regression model from R, however I have this error message: Error in file(con, "wb") : cannot open the connection In addition: Warning messages: 1: In file.create(to[okay]) : cannot create file 'c:/Program Files/WinBUGS14//System/Rsrc/Registry_Rsave.odc', reason 'Permission denied' 2: In file(con,

Hello, I am trying to use R2WinBUGS to conduct a mixed treatment comparison (MTC) analysis. On the surface, it seems to me that I am following the correct steps: (1) reading the data into R, (2) specifying initial values for the parameters in the model and (3) fitting the model to the data using the bugs() function in R2WinBUGS. However, I get the error message