Displaying 20 results from an estimated 200 matches similar to: "Unable to compile "Matrix" package"
2009 Jan 11
3
Package Matrix does not compile in R-devel_2009-01-10
Dear developers,
today I tried to build and install R-devel_2009-01-10 on FreeBSD
8.0-CURRENT (i386) for testing purposes.
All went well until compiling the now recommended (integrated) Matrix
package. At this point the following break occured:
------------------------------------------------
begin installing recommended package Matrix
* Installing *source* package 'Matrix' ...
**
2008 Jan 28
1
Package Installation produces "linux/limits.h: No such file or directory" error when installing the lpSolve package
Dear Friends,
I am trying to install a few packages in R and am receiving error messages.
Since the error messages are different, I am posting them separately. The
second error is with the installation of lpSolve.
The core error message is:
========================================================================
In file included from /usr/include/bits/posix1_lim.h:153,
from
2007 Oct 01
1
lpSolve doesn't compile because of a malloc.h error
Under freebsd 6.2-p7 i386, R 2.5.1,gcc-4.2.2 I'm unable to compile package
lpSolve because:
hpbsd# R CMD INSTALL lpSolve_5.5.8.tar.gz
* Installing to library '/usr/local/lib/R/library'
* Installing *source* package 'lpSolve' ...
** libs
cc -std=gnu99 -I/usr/local/lib/R/include -I/usr/local/lib/R/include -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE
2012 Aug 02
1
Cannot install the 'igraph' package
Hi!
I want to use R for network analysis and have tried to install the
'igraph' package. Unfortunately, the installation is aborted by an error:
--snip--
gcc -std=gnu99 -I/usr/lib64/R/include -DNDEBUG -I/usr/local/include
-DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -I/usr/local/include
-fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector
-funwind-tables
2009 Feb 11
1
Problem with R using pgi compiler on x86_64
Hi,
we have installed R-2.8.1 using the current pgi compiler (8.0.2) for
AMD64 on a SLES9 system.
When I try to install "Matrix" everything is fine until the last step.
make[1]: Leaving directory `/tmp/R.INSTALL.TW3399/Matrix/src/AMD'
pgCC -L/usr/lib64 -L/usr/X11R6/lib64 -pgf90libs -o Matrix.so
CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o
chm_common.o
2006 Jan 11
2
Problem with making Matrix
Hi R-help citizens,
I'm having trouble making version 0.99-6 of Matrix on FreeBSD 6.0.
The error message is:
* Installing *source* package 'Matrix' ...
** libs
gcc -I/usr/local/lib/R/include -I/usr/local/include -D__NO_MATH_INLINES -fPIC -g -O2 -c Csparse.c -o Csparse.o
... numerous lines deleted ...
gcc -I/usr/local/lib/R/include -I/usr/local/include -D__NO_MATH_INLINES
2014 Dec 15
1
R build failure under gcc 4.9's link time optimization
R fails to build with visibility on and gcc 4.9's link time optimzation, because
of its practice of building part of it as archive first. Specifically
it builds some bundled libraries as archive first, the symbols of which
are then entirely invisible in gcc 4.9.
The Matrix package also does this awful practice, with CHOLMOD.a COLAMD.a AMD.a SuiteSparse_config.a .
One way of fixing R is:
2010 Dec 01
1
Install package 'Matrix' problem
64-bit R-2.12.0 was installed on Sun SPARC Solaris 10. Compiler used is solstudio12.2. Attached is the configure script.
I then tried to install a recommended package called Matrix. The compilation failed with the following messages,
.......
CC -library=stlport4 -G -L/opt/csw/lib/sparcv9 -L/opt/solstudio12.2/prod/lib/v9 -o Matrix.so CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o
2009 Feb 21
1
R-devel/Linux x64/Sun Studio 12: Problem with Matrix
Dear Developers,
motivated by the new Sun Studio checks I compiled R-devel and several of
our packages with Sun Studio 12 on Fedora x64.
Everything worked fine and R-devel runs, with the exception of package
Matrix where compilation crashes with the following message. The error
occurs during building of the recommended packages and also if Matrix is
compiled separately:
[...]
CC -G -lCstd
2012 Jul 24
1
igraph build problems
Hello:
I've been trying for days now to get igraph working on a debian sarge
install. There does not appear to be any pre-built packages, and when
I try and install within R, it blows up on the final linking, claiming
its unable to find libgfortran (which IS installed, and IS working for
all other users of the compiler).
I started up R and ran: install.packages("igraph"). It
2009 Oct 29
2
Makevars, cc files in multiple directories
Hello,
In the src folder of my R package I have
a.cc
b.cc
f/g/x.cc
my Makevars.in has
all: $(SHLIB)
upon installing only, a.o and b.o is build and the final dll is
comprised of a.o and b.o
How can I instruct $(SHLIB) to pick up its source files from all
subdirectories (or maybe a subset, though here it will be all)
in src ?
Much thanks
Saptarshi
2009 Mar 01
3
CompRect modification
Me and Dennis Kasprzyk changed CompRect to be more intuitive and easily
replace XRectangle use.
This patch changes CompRect and whole Core.
Thanks for attention.
--
Eduardo Gurgel Pinho
(GELSoL-UFC)
(Gentoo) Linux User #415930
http://edgurgel.wordpress.com
http://alu.dc.ufc.br/~eduardo
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2007 Aug 30
1
Another issue with the Matrix package.
Hi all,
I am encountering a strange issue with the Matrix package. I have just built
R-devel from source on my macbook pro, and I wonder if others can reproduce
this problem. I will give example code to go along:
Starting a fresh R session:
R version 2.6.0 Under development (unstable) (2007-08-30 r42697)
Copyright (C) 2007 The R Foundation for Statistical Computing
ISBN 3-900051-07-0
...
>
2009 Feb 25
1
[PATCH] CompRect more intuitive
Hi,
Compiz++ uses CompRegion instead of XRectangle, right? This patch tries to
improve CompRect usability
*First*
I was using CompRect, but I've found that the only way to modify a CompRect
is using setGeometry function:
void
CompOutput::setGeometry (int x1, int x2, int y1, int y2);
So I created setX1, setY1, setX2, setY2 functions
*Second*
As you can see above, setGeometry uses:
2014 Dec 10
2
[LLVMdev] Metadata/Value split has landed
> On 2014 Dec 10, at 08:40, Tom Stellard <tom at stellard.net> wrote:
>
> On Tue, Dec 09, 2014 at 09:22:16PM -0800, Duncan P. N. Exon Smith wrote:
>> The `Metadata`/`Value` split (PR21532) landed in r223802 -- at least, the
>> C++ side of it. This was a rocky day, but I suppose that's what I get
>> for failing to stage the change in smaller pieces.
>>
2009 Feb 11
1
Compiling Matrix on Solaris 10 x86-64 Sun Studio 12
Hi all,
I have trouble to compile Matrix packages on Solar10 x86-64 with Sun compilers.
I saw some postings on this but am not sure how to solve this problem.
It is becoming critical as I cannot install biocLite() because of its dependency on Matrix.
Could you direct me how to resolve the issue?
Thanks in advance!
Dongseok
R version 2.8.1 (2008-12-22)
Copyright (C) 2008 The R Foundation for
2019 Aug 09
2
Bind9 doesn't updated - TSIG error with server: tsig verify failure
Em qui, 8 de ago de 2019 ?s 04:30, Rowland penny via samba <
samba at lists.samba.org> escreveu:
> > What a lot of work you didn't need to do, 'samba-tool domain demote
> --remove-other-dead-server=samba4bkp' would have done it for you ;-)
>
Good to know it. I'll tried if I face the same problem.
Em qui, 8 de ago de 2019 ?s 04:30, Rowland penny via samba <
2009 Feb 05
1
Swap plugin and Compiz 0.8.0
**
*Purpose*
We were missing a plugin that could just exchange properties. Sometimes you
just need to minimize a window and "unminimize" other. To do it, you would
need to perform 2 or more clicks. So, we created Swap! [image: :)]
*Description*
It allows you to swap the geometry of two windows. Basically we changed
Static Switcher plugin to swap active window with another window.
2014 Dec 10
4
[LLVMdev] Metadata/Value split has landed
The `Metadata`/`Value` split (PR21532) landed in r223802 -- at least, the
C++ side of it. This was a rocky day, but I suppose that's what I get
for failing to stage the change in smaller pieces.
As of r223916 (lldb), I'm not aware of any remaining (in-tree) breakage,
so if I've missed some problem in the sea of buildbot errors, please
flag me down.
I'll follow up soon with
2011 Jan 26
2
Colour area under density curve
Hello,
I have this code to plot a certain normal distribution and represent the pnorm
value for a certain "x":
x<-300
xx <- seq(2.5,7.5, by=0.1)
yy <- dnorm(xx,5.01,0.77)
d<-signif(pnorm(log(x), 5.01,0.77),4)
xpts <- round(exp(0:8))
par(bg = "antiquewhite")
plot(xx,yy, type="l", col="blue", lwd=2, xaxt="n",