similar to: How to analysis Y98 chips using RankProd package?

Hi all, I am working for nest box occupancy data for birds and would like to construct a Markov transition matrix, to derive transition probabilities for ALL years of the study (not separate sets of transition probabilities for each time step). The actual dataset I'm working with is 125 boxes over 14 years that can be occupied by 7 different species, though I have provided a slimmed down

dear all, i have a little question, but it make me torment long time hope you can help me and give some advices , thanks i use smoothing spline in package gam the model > m1=gam(y~ost+wst+park10+sch50+comm+build+suite+y05+y06+y07+y99+y98+s(builarea)+s(age)+s(fl)+s(totfl)+s(cbd)+s(redl)) and summary(m1) can show the "s"(smoothing) variables' Signif. codes.

Hello together, this is ma first post, so please aplogize me if post this in the wrong section. I have problem concerning ma two matrizes. After a regressione and so on, I got two matrizes Matrixres contains the results of ma calculation. Matrixr contains my detiene, which where Aldo used for the regression. Please ser the following code: #Datei einlesen residual =

Hello: I am a novice R user, but I have been working my way through the manuals / tutorials, ... I have R / Deducer up and running, and know the basics. I want to analyze a microarray (gene expression) dataset. I need to input the data into R as a multidimensional (multi-way) array, something on the order of 15,000 x 3 x 8 x 2 [genes x replicates x time points x treatments] I've

You are right, maintainer does keep a list of model's packages. So how do I use a variable instead of $adaboost$? getModelInfo()$adaboost$library Also, server not found: http://rwiki.sciviews.org/doku.php?id=getting-started:reference-cards:getting-help On Tue, Aug 1, 2017 at 11:46 AM, Bert Gunter <bgunter.4567 at gmail.com> wrote: > I have provided you all the

I am very new to R. I have some data from a CVS stored in vdata with 4 columns labeled: X08, Y08, X09, Y09. I have created two new "columns" like so: Z08 <- (vdata$X08-vdata$Y08) Z09 <- (vdata$X09-vdata$Y09) I would like to use chisq.test for each "row" and output the p-value for each in a stored variable. I don't know how to do it. Can you help? so far I have

You should read the section on Indexing in the Introduction to R document that comes with R, regarding $ and `[[`. -- Sent from my phone. Please excuse my brevity. On August 1, 2017 2:44:18 AM PDT, Dimlak Gorkehgz <rain8dome9 at gmail.com> wrote: >You are right, maintainer does keep a list of model's packages. > >So how do I use a variable instead of $adaboost$? >

The command hist(c(2,2,2,4,5,6)) returns a histogram that looks incorrect -- 3 in the bin labeled 2 on the left, but 1 each in the bins labeled 3,4,5 on the left. Thanks! Pam Surko -------------------- > version _ platform i386-pc-mingw32 arch i386 os mingw32 system i386, mingw32 status major 1 minor

Hi, everyone, I ran the test case in "Introduction to the Bioconductor marrayInput package first. When I ran the session in (read.marrayRaw) I got the following error messages. Other sessions work well. The functions and errors are labled with blue and red respectively. >mraw <- read.Spot(path = datadir, layout = galinfo$layout, gnames = galinfo$gnames, target = swirlTargets) Error

I am trying to read and write database tables that have a date field in them. I am constructing a data.frame, then using dbWriteTable to create the table and dbReadTable to read it. >datatbl<-data.frame( dates, trialnum, fooddel, ethdel, trialtime, trialtype, deliveries, food, ethanol, fcumrec, dcumrec, rrf, rrd) >ifelse(startdate==filelist,

Dear R-Helpers, I have a data.frame (df) and the head of data.frame looks like ProbeUID ControlType ProbeName GeneName SystematicName 1665 1577 0 pSysX_50_22_1 pSysX_50 pSysX_50 5422 5147 0 pSysX_49_8_1 pSysX_49 pSysX_49 4042 3843 0 pSysX_51_18_1 pSysX_51 pSysX_51 3646 3466 0 sll1514_0_2 sll1514 sll1514

Hello, just installed build 50, and typed ''zfs'' in a shell. I got the help message, and was surprised with it : -------------------- bash-3.00# zfs commande manquante syntaxe : zfs command args ... o? ''command'' est l''une des possibilit?s suivantes : create [[-o property=value] ... ] <filesystem> create [-s] [-b blocksize] [[-o

Hi all I have just downloaded the sma package from CRAN. On installing on my linux machine, I get the message > library(sma) > data(MouseArray) Warning message: file 'MouseArray.RData' has magic number 'RDX1' Use of save versions prior to 2 is deprecated Hereafter, MouseArray is not found: > MouseArray Error: object "MouseArray" not found We were

Hello all, I am implementing support for .debug_names section (which is introduced in DWARFv5 standard as replacement for .debug_pubnames and .debug_pubtypes). The question is: should usage of DWARF version 5 force generation of .debug_names instead of .debug_pubnames or we can make it just default behavior and provide user with the interface (cmd switch) to use other DWARFv5 features but

'Writing R Extensions', section 1.1.5, in the part about a package's 'inst' directory, says that if NEW is in both the top level and in the inst directory, the in inst will be installed: Note that with the exceptions of INDEX, LICENSE/LICENCE and NEWS, information files at the top level of the package will *not* be installed and so not be known to users of Windows and macOS

Hi I recently compiled and installed R on a linux PPC system. > version _ platform powerpc-unknown-linux-gnu arch powerpc os linux-gnu system powerpc, linux-gnu status major 1 minor 1.1 year 2000 month August day 15 language R The installation seemed to go well, except that configure didn't find X11 support, and consequently I can not output any

Hello! For comparing two non-normally distributed samples, Leech (2002) suggested to report nonparametric effect size indices, such as Vargha & Delaney's A or Cliff's d. I tried to search the R-sites, but could not find related procedures or packages that include nonparametric effect sizes. Thank you for your help! Citation: Leech (2002). A call for greater use of nonparametric

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Hi Forgive my ignorance. I am selecting a column of a data.frame using the column name, and I want to know what the resulting column "is". My data frame is called "submin" and the column name is held in a variable called "display.gname" Eg: > is.data.frame(submin) [1] TRUE > is.data.frame(submin[,display.gname]) [1] FALSE >

I have recently upgraded to Ubuntu Gutsy and, for the first time, am using a 64-bit installation. After failing miserably to install R from source, not a problem for me in the past with a 32-bit install, I went the route of using the Debian Etch build. This went smoothly, but I am unable to update my numerous R and BioConductor packages, getting non-zero exit status errors on each package. Is