similar to: installing ncdf on Ubuntu 10.04

I am trying to install the package boss but i am getting error below: Please advice install.packages("boss") --- Please select a CRAN mirror for use in this session --- CRAN mirror 1: 0-Cloud 2: Argentina (La Plata) 3: Argentina (Mendoza) 4: Australia (Canberra) 5: Australia (Melbourne) 6: Austria 7: Belgium 8:

I am trying to install the package boss but i am getting error below: Please advice install.packages("boss") --- Please select a CRAN mirror for use in this session --- CRAN mirror 1: 0-Cloud 2: Argentina (La Plata) 3: Argentina (Mendoza) 4: Australia (Canberra) 5: Australia (Melbourne) 6: Austria 7: Belgium 8:

Friends, I tried to install ncdf package in ubuntu with the following command. R CMD INSTALL --configure-args="-with-netcdf_incdir=/apps/netcdf/4.0.1/gcc/include -with-netcdf_libdir=/apps/netcdf/4.0.1/gcc/lib" ncdf_1.6.tar.gz The installation was stopped throwing the following error. I tried to google it but didnt find any solution. someone kindly write me what is going wrong. **

Hi I used the command R CMD INSTALL ncdf to install ncdf package in linux. Can somebody explain to me what might be wrong. Thanks. Below is the error. * Installing *source* package 'ncdf' ... Special note: checking for gcc... gcc checking for C compiler default output... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for

Dear R users I am attempting to add lncdf_1.6.tar.gz libraries within R, and have failed. I have R version 2.8.1, and are running on fedora 10 Kernel Linux 2.6.293.-60.fc10.x86_64. I've run R CMD INSTALL ncdf_1.6.tar.gz and I have the following --------------- * Installing to library '/usr/lib64/R/library' * Installing *source* package 'ncdf' ... checking for gcc... gcc

Hi, I am using the package ncdf to create netCDF files and I want to mimic the the header of an exiting netCDF file created outside of R. Below is what the existing header looks like (part of it that is different): netcdf ccd1984_05_08 { dimensions: lat = 1974 ; lon = 1894 ; time = UNLIMITED ; // (1 currently) variables: int time(time) ;

Hi All, I am trying to install ncdf package on a Linux 64-bit machine. I successfully installed netcdf using this command, ./configure --prefix=/home/challar/netcdf/ --disable-netcdf4 I then tried to install ncdf package in R R CMD INSTALL --configure-args="-with-netcdf_incdir=/home/challar/netcdf/include -with-netcdf_libdir=/home/challar/netcdf/lib" ncdf_1.6.3.tar.gz I get this

Dear R communities Could you please help me with the problem I encounter while trying to install the ncdf package? download.packages("ncdf", "/home/user/soft/R/library/") cd /home/user/soft/R/library R CMD INSTALL ncdf_1.6.tar.gz # fail sudo R CMD INSTALL ncdf_1.6.tar.gz # fail cd /home/user/soft/ # download

Should one ask questions relating to the R package 'ncdf' here? or look for a more netCDF-oriented (but probably less R-oriented) list? Why I ask: I'm relatively new to R, which I've only used in the past for graphics. I'm trying to learn R as an alternative to manipulating netCDF files with NCO (which works well but lacks all the other R goodnesses). Hence I've got a

Dear all, I would like to use data in .netcdf format and for those I have to use the netCDF or ncdf packages. Problem : these packages don't seem to work : "Error in testRversion(descfields) : This package has not been installed properly See the Note in ?library" (with netCDF package) Does anybody have the same problems with these packages ? Is there any

Aloha, I just made some quick hacks on the configure script with the 'ncdf' package to make it link with the opendap/dods libraries (opendap.org) rather than the netcdf api library. Basically, this allows a user to interact in R with a remotely served dataset as if it were a netcdf file on the local filesystem (read-only). Functionality with local files should continue to work as

How to programmatically (i.e., without no or minimal handcoding) copy a netCDF file? (Without calling > system("cp whatever wherever") :-) Why I ask: I need to "do surgery" on a large netCDF file (technically an I/O API file which uses netCDF). My group believes a data-assimilation error caused a data variable to be corrupted in a certain way, so I'm going to

Dear All, I recently got a 64bit machine and had netcdf-3.6.2 installed. Then I tried to install ncdf package but got the following error message when using netcdflib: gcc -std=gnu99 -I/home/ljin/share/R-2.6.1/include -I/home/ljin/share/R-2.6.1/include -I. -I/usr/local/include -fpic -g -O2 -c ncdf2.c -o ncdf2.o gcc -std=gnu99 -I/home/ljin/share/R-2.6.1/include

Dear all, I have a problem in writing a variable to a NetCDF-File. My code works pretty well until the step put.var.ncdf(): # Get variables #--------------------- data1 <- open.ncdf("PREC_me_03-1500.nc") prec1 <- get.var.ncdf(data1,"PRECT") dim.time <- get.var.ncdf(data1,"time2") close.ncdf(data1) # Calculation #--------------------- spi24.me <-

I've a linux system with 2Gb of memory which is not enough for reading a 446Mb netcdf file using ncdf: library(ncdf) ncold <- open.ncdf("gridone.grd") Error: cannot allocate vector of size 1822753 Kb When I look at the free memory in my system I can see that none of the Swap space is being used by R. I am a newbie in linux and R, I've read the Memory help pages but still

Hi All, i'm on a debian linux 64bit, i'm tying to install the netcdf intraface, i tried both ncdf and ncdf4 but trying to build i received the error : (i have necdf installed on my machine and it is able to fiund it .. no missed .h) epy at epinux:~$ sudo R CMD INSTALL --configure-args="-with-netcdf_incdir=/usr/include -with-netcdf_libdir=/usr/lib" ncdf4_1.8.tar.gz *

Greetings. I am attempting to add NetCDF libraries within R, and have failed. We have R version 2.8, and are running on a 64-bit Redhat Linux 2.6.18 kernel: Red Hat Enterprise Linux Client release 5.2 (Tikanga) Linux halfmoon.ncdc.noaa.gov 2.6.18-92.1.22.el5 #1 SMP Fri Dec 5 09:28:22 EST 2008 x86_64 x86_64 x86_64 GNU/Linux I have run the installation instructions found at

Dear CSAG R users, I will be glad if someone can point out what I am doing wrong or not doing at all in this. I am trying to write out netcdf file in R. I have 26 time step but only the first time step is written. For example: >library(ncdf) >path <- '/home/work/' >forecast <- open.ncdf(paste(path,'cam.1980.2005.nc',sep="")) > fore <-

Dear CSAG R users, I will be glad if someone can point out what I am doing wrong or not doing at all in this. I am trying to write out netcdf file in R. I have 26 time step but only the first time step is written. For example: >library(ncdf) >path <- '/home/work/' >forecast <- open.ncdf(paste(path,'cam.1980.2005.nc',sep="")) > fore <-

Friends, I am a newbie to R. Just installed and started with R. I installed netcdf library (netcdf-4.0.tar.gz) and then ncdf package of R from CRAN with the following command. R CMD INSTALL --configure-args="-with-netcdf_incdir=/usr/local/netcdf/include -with-netcdf_libdir=/usr/local/netcdf/lib" ncdf_1.6.tar.gz The installation was successful. But when i try to use ncdf inside R, i