similar to: Syntax coloring in R console

Hi Hilmar, weird. The memory problem seems be due to recursion (my R, version 3.3.3, says: Error: evaluation nested too deeply: infinite recursion / options(expressions=)?, just write traceback() to see how it happens), but why does it segfault with xlsx? Nb xlsx is the culprit: neither rJava nor xlsxjars cause the problem. On the other hand, quick googling for r+xlsx+segfault returns tons of

Hi, this is a problem that occurs in the presence of two libraries (limma, xlsx) and leads to a crash of R. The problematic code is the wrong application of sweep or the product ("*") function on an LIMMA MAList object. To my knowledge, limma does not define a "*" method for MAList objects. If only LIMMA is loaded but not package xlsx, the code does not crash but rather

Dear all, I have an n x n matrix of p-values. The matrix is symmetrical, as it describes the "each against each" p values of correlation coefficients. How can I best correct the p values of the matrix? Notably, the total number of the tests performed is n(n-1)/2, since I do not test the correlation of each variable with itself. That means, I only want to correct one half of the matrix,

suppose I have some logical vector x <- as.logical(c(0,0,0,1,0,0,1,1,0)) x How would I make the words TRUE appear on the screen in a different color from the words FALSE? Thanks. --Chris -- Christopher W. Ryan, MD SUNY Upstate Medical University Clinical Campus at Binghamton 40 Arch Street, Johnson City, NY 13790 cryanatbinghamtondotedu "If you want to build a ship, don't drum

Dear all Is it possible to get basic colour highlighting for inputs and outputs in the R terminal? I am looking for something similar to what GUIs provide, such as JGR and (I think) the Windows R GUI: colouring all inputs in red, and all outputs in blue. All this in a colour-aware console (in my case, on Linux). I've been looking into xterm256 and highlight, but I am sofar unable to do with

Hi, I observed a slight problem in deparse(): it will add spaces around most operators except /. I wonder if this is easy to fix. I know this is quite trivial, but I will appreciate if / is not treated as an exception. Examples: > deparse(expression(1/1)) [1] "expression(1/1)" > deparse(expression(1+1)) [1] "expression(1 + 1)" > deparse(expression(1%in%1)) [1]

Hi all I am writing to you with a question regarding the pvclust package. And yes, before the usual people produce their usual contact-the-package-maintainers line, ye, I tried that but the emails one can find on the web either bounce or are not responded to. Also, yes, this error has already been reported as a bug but been shot down as not reproducible

Hi Duncan, I've just read the help for the plot3d function you've written and tried out the example code given at the bottom of the page. I then modified the function by adding an aspect ratio of 0.1 and ran it again, which crashed my R. I am using 2.12.2 on Windows, if that tells you anything. Best wishes, Roman

Hi, Recently I noticed file.copy() would discard the file mode information. Is this the expected behaviour or a bug for file.copy()? > file.create('testfile') [1] TRUE > file.info('testfile') size isdir mode mtime ctime testfile 0 FALSE 644 2011-03-05 17:06:39 2011-03-05 17:06:39 atime uid gid uname grname

Hi, Recently I noticed file.copy() would discard the file mode information. Is this the expected behaviour or a bug for file.copy()? > file.create('testfile') [1] TRUE > file.info('testfile') size isdir mode mtime ctime testfile 0 FALSE 644 2011-03-05 17:06:39 2011-03-05 17:06:39 atime uid gid uname grname

Hi Everybody I want to print a latex table containing math characters in the column heading These are the formulae I want to use as column headings. It prints OK from TeX $\sum_{i}\sum_{j}C_{P,i,j,y}\times\mathit{FC}_{i}$, $XU_{alt,y}$, $n$, $\bar{C}_{P,y}$ My plan was to create a character vector with these and later rbind the values to them. When I create the vector like:

Thanks Jeremy, i'm analyzing this with the application team, we'll see what we can find. > I was hoping to find a way for the samba4 server to behave like samba3 (as > in ignoring bad characters and replacing them with an underscore > character), which in the end resulted in the best compromise. In the meantime, do you have any idea why there is difference between the two

A colleague?s R program behaved differently when I ran it, and we thought we traced it probably to different results from string comparisons as below, with different R versions. However the platforms also differed. A friend ran it on a few machines and found that the comparison behavior didn?t correlate with R version, but rather with platform. I wonder if you?ve seen this. If it?s not some

x <- "\u0663" y <- 3 x == y # FALSE rank(c(x, y)) # c(1.5, 1.5) -- http://had.co.nz/

Dear R users, I need to add 0 in front of a series of numbers, e.g. 1->001, 19->019, Is there a fast way of doing that? Many thanks yan [[alternative HTML version deleted]]

Running "as.character" on a large POSIXct causes a segfault on my 2.11 (2010-04-22) install. Seems to crash at around 9e4 ... on OSX and Ubuntu at least. > invisible(as.character(Sys.time()+1:7e4)) > invisible(as.character(Sys.time()+1:8e4)) > invisible(as.character(Sys.time()+1:9e4)) Error: segfault from C stack overflow > invisible(as.character(Sys.time()+1:5e5)) Error:

Dear Group, I am looking for ways to use R and Matlab. Doing the data transformations in R and using the data in Matlab to analyze with some pre-defined scripts. Any good ways to transfer the data into matlab in its most recent version? I tried using R.matlab but the writeMat output is not readable by Matlab. I just need to output a data.frame and read it as is into matlab where I can do any

Hello, As an example, I ran the following code: library("rgl") example(plot3d) rgl.snapshot("test.png") The full plot is visible in the window titled RGL device 1 [Focus], but only a small

Hello, As an example, I ran the following code: library("rgl") example(plot3d) rgl.snapshot("test.png") The full plot is visible in the window titled RGL device 1 [Focus], but only a small

I'm trying to dynamically build variable names to use on a list. Let's say I have a list like this one: l <- list(V1_1=c(1,2,3), V1_2=c('One','Two','Three')) And I succesfully build my variable name like this: paste('l$', 'V1_1', sep='') Why can't I just run a mean call with the pasted variable name? mean(paste('l$',