Jeff Ryan
2010-May-26 11:29 UTC
[Rd] segfault on 2.11.0 with large POSIXct vector using as.character
Running "as.character" on a large POSIXct causes a segfault on my 2.11 (2010-04-22) install. Seems to crash at around 9e4 ... on OSX and Ubuntu at least.> invisible(as.character(Sys.time()+1:7e4)) > invisible(as.character(Sys.time()+1:8e4)) > invisible(as.character(Sys.time()+1:9e4))Error: segfault from C stack overflow> invisible(as.character(Sys.time()+1:5e5))Error: segfault from C stack overflow Thanks, Jeff> sessionInfo()R version 2.11.0 (2010-04-22) x86_64-apple-darwin10.2.0 locale: [1] en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8 attached base packages: [1] stats graphics grDevices utils datasets methods base> sessionInfo()R version 2.11.0 (2010-04-22) i486-pc-linux-gnu locale: [1] LC_CTYPE=en_US.utf8 LC_NUMERIC=C [3] LC_TIME=en_US.utf8 LC_COLLATE=en_US.utf8 [5] LC_MONETARY=C LC_MESSAGES=en_US.utf8 [7] LC_PAPER=en_US.utf8 LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=en_US.utf8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base>-- Jeffrey Ryan jeffrey.ryan@insightalgo.com ia: insight algorithmics www.insightalgo.com [[alternative HTML version deleted]]
Gabor Grothendieck
2010-May-26 11:48 UTC
[Rd] segfault on 2.11.0 with large POSIXct vector using as.character
On my Vista system there is no seg fault:> invisible(as.character(Sys.time()+1:5e5)) > win.version()[1] "Windows Vista (build 6002) Service Pack 2"> R.version.string[1] "R version 2.11.0 Patched (2010-04-26 r51822)" On Wed, May 26, 2010 at 7:29 AM, Jeff Ryan <jeff.a.ryan at gmail.com> wrote:> Running "as.character" on a large POSIXct causes a segfault on my 2.11 > (2010-04-22) install. ?Seems to crash at around 9e4 ... on OSX and Ubuntu at > least. > >> invisible(as.character(Sys.time()+1:7e4)) >> invisible(as.character(Sys.time()+1:8e4)) >> invisible(as.character(Sys.time()+1:9e4)) > Error: segfault from C stack overflow > > >> invisible(as.character(Sys.time()+1:5e5)) > Error: segfault from C stack overflow > > Thanks, > Jeff > >> sessionInfo() > R version 2.11.0 (2010-04-22) > x86_64-apple-darwin10.2.0 > > locale: > [1] en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8 > > attached base packages: > [1] stats ? ? graphics ?grDevices utils ? ? datasets ?methods ? base > > >> sessionInfo() > R version 2.11.0 (2010-04-22) > i486-pc-linux-gnu > > locale: > ?[1] LC_CTYPE=en_US.utf8 ? ? ? LC_NUMERIC=C > ?[3] LC_TIME=en_US.utf8 ? ? ? ?LC_COLLATE=en_US.utf8 > ?[5] LC_MONETARY=C ? ? ? ? ? ? LC_MESSAGES=en_US.utf8 > ?[7] LC_PAPER=en_US.utf8 ? ? ? LC_NAME=C > ?[9] LC_ADDRESS=C ? ? ? ? ? ? ?LC_TELEPHONE=C > [11] LC_MEASUREMENT=en_US.utf8 LC_IDENTIFICATION=C > > attached base packages: > [1] stats ? ? graphics ?grDevices utils ? ? datasets ?methods ? base >> > > -- > Jeffrey Ryan > jeffrey.ryan at insightalgo.com > > ia: insight algorithmics > www.insightalgo.com > > ? ? ? ?[[alternative HTML version deleted]] > > ______________________________________________ > R-devel at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel >
Duncan Murdoch
2010-May-26 12:01 UTC
[Rd] segfault on 2.11.0 with large POSIXct vector using as.character
Jeff Ryan wrote:> Running "as.character" on a large POSIXct causes a segfault on my 2.11 > (2010-04-22) install. Seems to crash at around 9e4 ... on OSX and Ubuntu at > least. >This has been fixed for a while in R-patched. The 2.11.1 release on Monday should be fine. Apparently people aren't running the betas/release candidates. You really should run the test versions to flush out bugs. If you'd run the pre-release versions of 2.11.0, this bug would likely have been found before release. The standard tests can miss things; the advantage of open source is there are many eyes looking for bugs. But if those eyes are closed, the model doesn't work. Duncan Murdoch> >> invisible(as.character(Sys.time()+1:7e4)) >> invisible(as.character(Sys.time()+1:8e4)) >> invisible(as.character(Sys.time()+1:9e4)) >> > Error: segfault from C stack overflow > > > >> invisible(as.character(Sys.time()+1:5e5)) >> > Error: segfault from C stack overflow > > Thanks, > Jeff > > >> sessionInfo() >> > R version 2.11.0 (2010-04-22) > x86_64-apple-darwin10.2.0 > > locale: > [1] en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8 > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > > >> sessionInfo() >> > R version 2.11.0 (2010-04-22) > i486-pc-linux-gnu > > locale: > [1] LC_CTYPE=en_US.utf8 LC_NUMERIC=C > [3] LC_TIME=en_US.utf8 LC_COLLATE=en_US.utf8 > [5] LC_MONETARY=C LC_MESSAGES=en_US.utf8 > [7] LC_PAPER=en_US.utf8 LC_NAME=C > [9] LC_ADDRESS=C LC_TELEPHONE=C > [11] LC_MEASUREMENT=en_US.utf8 LC_IDENTIFICATION=C > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > >
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