similar to: Installing packages and passing parameters

I have been unable to install the package RandomFields. I am using R 2.9.0-4 on Ubuntu 9.04. To install, I use the command: sudo R CMD INSTALL RandomFields_1.3.37.tar.gz The output follows below. Any help Would be appreciated. D. Hoysak Brandon University * Installing to library ?/usr/local/lib/R/site-library? * Installing *source* package ?RandomFields? ... ** libs g++

I have been unable to install the package RandomFields. I am using R 2.9.0-4 on Ubuntu 9.04. To install, I use the command: sudo R CMD INSTALL RandomFields_1.3.37.tar.gz The output follows below. Any help Would be appreciated. D. Hoysak Brandon University * Installing to library ?/usr/local/lib/R/site-library? * Installing *source* package ?RandomFields? ... ** libs g++

RHEL 6 installed R version 3.2.3 from EPEL installed Start R and use the following command, but got warnings! install.packages("rstan", dependencies = TRUE, repos = "http://cran.r-project.org/") ... g++ -m64 -shared -L/usr/lib64/R/lib -L/usr/local/lib64 -o RcppEigen.so RcppEigen.o RcppExports.o fastLm.o -L/usr/lib64/R/lib -lRlapack -L/usr/lib64/R/lib -lRblas -lgfortran -lm

Hi there, I'm trying to install the package RcppArmadillo in my R 2.11.1 which I installed and regularly update via Ubuntu's repositories. When I try to install RcppArmadillo from CRAN I get: > install.packages('RcppArmadillo', lib='~/myRlibs') [...] g++ -shared -o RcppArmadillo.so RcppArmadillo.o fastLm.o -L/home/matias/myRlibs/Rcpp/lib -lRcpp

Dear R-devel: The Cluster administrators at KU got enthusiastic about testing R-3.2.2 with Intel MKL when I asked for some BLAS integration. Below I forward a performance report, which is encouraging, and thought you would like to know the numbers. Appears to my untrained eye there are some extraordinary speedups on Cholesky decomposition, determinants, and matrix inversion. They had

Dear lists: I could not calculate what is wrong with my installing. Could you help me to find the solution? Thanks. Following are the installing screen massages: install.packages("demography") 将程序包安装入‘/home/zzk/R/i686-pc-linux-gnu-library/2.12’ (因为‘lib’没有被指定) --- 在此連線階段时请选用CRAN的鏡子 --- 载入Tcl/Tk接口... 完成 also installing the dependencies ‘akima’, ‘rgl’, ‘misc3d’, ‘quadprog’, ‘zoo’, ‘locfit’,

Hello, I would appreciate *any* ideas on this problem. I'm the maintainer of a package ("subselect"), which on CRAN's Daily Package Checks is OK on all flavours of R, except r-devel Linux x86_64, where there is a "memory not mapped" segfault with the very first example that is tried out (output below). Additionally, a user with an AMD64 machine has just reported a

Dear all, I'm using R version 3.2.0 in Ubuntu 12.04 LTS. While trying to install any package I get the error: "/usr/bin/ld: cannot find -lgfortran" If I open a Terminal and run "ldconfig -p | grep libgfortran"?, I get:? "libgfortran.so.3 (libc6,x86-64) => /usr/lib/x86_64-linux-gnu/libgfortran.so.3" I've been an R user for two years and this is the

I am getting error messages while installing R package lme4. Please advice thanks Pramod trying URL 'http://cran.mtu.edu/src/contrib/lme4_0.999999-0.tar.gz' Content type 'application/x-gzip' length 1074142 bytes (1.0 Mb) opened URL ================================================== downloaded 1.0 Mb * installing *source* package 'lme4' ... ** package

Does any have installation instructions for this? When I run install.packages('quantreg') I get: gcc -std=gnu99 -shared -o quantreg.so akj.o boot.o brute.o chlfct.o cholesky.o combos.o crq.o crqfnb.o dsel05.o etime.o extract.o idmin.o iswap.o kuantile.o mcmb.o penalty.o powell.o rls.o rq0.o rq1.o rqbr.o rqfn.o rqfnb.o rqfnc.o sparskit2.o srqfn.o srqfnc.o srtpai.o -llapack -lblas

I am running Ubuntu 7.10 and R-2.6.0, and I am having trouble updating packages. There appears to be a problem involving gfortran. For example, here is the output of an attempt to update the Hmisc package. * Installing *source* package 'Hmisc' ... ** libs gfortran -fpic -g -O2 -c cidxcn.f -o cidxcn.o gfortran -fpic -g -O2 -c cidxcp.f -o cidxcp.o gfortran -fpic -g -O2 -c

Hello everyone. I am trying to build up understanding in R by trying to develop just some simple scenarios. I would like to explain you what I am trying to do and what I did so far. I would like to put inside a RasterLayer (raster package) a Gaussian field (for given covariance) using grf function (geoR package) 1. First I created a Raster Layer object r <- raster() # Default values are

Hi List, I'm having problems installing certain packages. When I try to install fields, I get the output below. I have highlighted the what I perceive as the first error (spam seems to be a dependency of fields). Can I assume this is causing dependency problems for fields, which fails to install at the end, or is there a deeper problem? I run Ubuntu Karmic Koala on R 2.9.2. 2>

I am trying to install two packages that are not available at CRAN (rmutil, dna). When trying the R CMD INSTALL with either file, I get an error message that ends with /usr/libexec/gcc/i686-apple-darwin8/4.0.1/libtool: can't locate file for: -lgfortran /usr/libexec/gcc/i686-apple-darwin8/4.0.1/libtool: file: -lgfortran is not an object file (not allowed in a library) Can anyone

Hi, I'm having some difficulty installing the RandomFields package in R 1.7.0 under FreeBSD. I've installed the geoR package with no difficulties. Following are the errors that I get: * Installing *source* package 'RandomFields' ... ** libs c++ -I/usr/local/lib/R/include -I/usr/local/include -mieee-fp -fPIC -O -pipe -c MPP.cc -o MPP.o c++ -I/usr/local/lib/R/include

Dear list, When compiling the R-2.3.0 on FC4 x86_64, I got the following errors: make[3]: Entering directory `/project/scratch3/ligroup/wuming/src/R-2.3.0/src/main' gcc -Wl,--export-dynamic -L/usr/local/lib64 -o R.bin Rmain.o CConverters.o CommandLineArgs.o Rdynload.o Renviron.o RNG.o apply.o arithmetic.o apse.o array.o attrib.o base.o bind.o builtin.o character.o coerce.o colors.o complex.o

On 7 May 2015 at 13:17, Johannes Ranke wrote: | I have no idea where the problem is, but I feel this strong urge to mention | that install.packages("sem") works fine on Debian squeeze (g++ 4.4.5), wheezy | (g++ 4.7.2) and jessie (g++ 4.9.2) using the R backport from CRAN... +1 As the messages all come from compilation, methinks something is wrong with the compiler setup. Maybe icc

I have developed an R package that works under Win32, but when I attempt to build it on Win64, I get ERROR: loading failed for 'x64' More precisely, I developed and tested the package under Win32 and it works. But when I move to a 64 bit Windows 7 (Home Premium) system, and attempt to build both 32 bit and 64 bit packages, the 32 bit package seems to build, but the 64 bit build

The package list was accessed October 28, 10:13 am MST using Windows XP and mirror USA (CA 1). Bill Morphet, Ph.D.

Hi, I am trying to install gee on our server but I get the error below. I do not have root on this machine so no control on how R was installed itself. It looks like it cannot find blas libs, the only ones i can find on the machine are: /usr/lib64/libblas.so.3 -> libblas.so.3.0.3 /usr/lib64/libblas.so.3.0 -> libblas.so.3.0.3 /usr/lib64/libblas.so.3.0.3 and : $ R CMD config BLAS_LIBS