similar to: Combining several plots besides a dendrogram?

Hello dear R-help group. I wish to plot a scatter plot using icons (or images) instead of points. Is it possible? and how so? Thanks, Tal ---------------------------------------------- My contact information: Tal Galili E-mail: Tal.Galili@gmail.com Phone number: 972-52-7275845 FaceBook: Tal Galili My Blogs: http://www.talgalili.com (Web and general, Hebrew) http://www.biostatistics.co.il

Dear list, I would like to start some R workshops at King's College London, and to do so, I would like to use the "Use R!" logo at http://www.agrocampus-ouest.fr/math/useR-2009//useR%21%202008_fichiers/useR-middle.png Since it seems to be difficult to get a shell account at KCL, I also went ahead and registered use-r.org.uk and am starting to put together a website at

I'd like to stretch a plotted character vertically, to create a "sequence logo". Is there a parameter to allow stretching text() output vertically or squeeze horizontally? I know about Oliver Bembom's seqLogo library, but this generates a sequence logo plot using a separate bitmap device. I want to recreate the sequence logo *inside* an existing plot. Alternatively, is

Hello all, I manually created an hclust object. Now I am looking to reorder the leafs so they won't intersect with each other, and would be happy for advises on how to do that. Here is an example code: #------------------------------------- a <- list() # initialize empty object # define merging pattern: # negative numbers are leaves, # positive are merged clusters (defined by row

The problem: =========== Once a dendrogram has a branch with both a line type AND a color (which is a character color), the plot.dendrogram function will not plot and return an error. I say this is a bug because (I believe), we would like a dendrogram to be able to use character colors, while also allowing control over line types. This e-mail includes an example, and what I think a solution

Hello dear R help group, I would like to download the tRNA data on: http://gtrnadb.ucsc.edu/download.html And then import it into R. Can anyone direct me as to how to do so? Thanks, Tal ---------------------------------------------- My contact information: Tal Galili E-mail: Tal.Galili@gmail.com Phone number: 972-52-7275845 FaceBook: Tal Galili My Blogs: http://www.talgalili.com (Web and

My question if in the Subject, but if to extend: I am specifically curious about WordPress blogs. But any solution will give me a lead. Thanks, Tal ---------------------------------------------- Contact me: Tal.Galili@gmail.com | 972-52-7275845 Read me: www.talgalili.com (Hebrew) | www.biostatistics.co.il (Hebrew) | www.r-statistics.com/ (English) [[alternative HTML version deleted]]

Hi all, Could anybody point me to some latest productivity tools in R? I am interested in speeding up my R programming and improving my efficiency in terms of debugging and developing R programs. I saw my friend has a R Console window which has automatic syntax reminder when he types in the first a few letters of R command. And he's using R under MAC. Is that a MAC thing, or I could do the

Hello. I have a small problem when I want to display a dendrogram for about 450 varieties. The label of theses varieties is too big and we can not see thems well. How can I do to resize the label smaller? Can you help me please? Thanks. [[alternative HTML version deleted]]

Hi R, I was using 'as.dendrogram' with the DIST coefficient, where the smaller values of the DIST coefficient, say that the objects are closer to each other, while the larger values of the coefficient say that the objects are far from each other. But now, I have my coefficient as the DICE coefficient(in some sense similar to correlation coefficient), where the larger coefficient

Hello dear R help group, I am trying to read a .txt file, with Hebrew column names, while keeping the column names looking well in R - but without success. I uploaded an example file to: http://www.talgalili.com/files/aa.txt And am trying the command: read.table("http://www.talgalili.com/files/aa.txt", header = T, sep = "\t") This returns me with: X.....ª X...ª......

After reading more, I understand I didn't formulate my last question correctly, so please allow me to rephrase: What I am looking for is a way to save the R console session output. That is, a command that would combine the results of using: ?sink # And ?savehistory My motivation for this is that doing it will allow someone who is a blind user of R to be able to easily export his results to

Hi everybody, I would like to count how many times names in list L, nombreL, apear in list C, nombreC. Can I improve the next program? cuenta <- 0 topL <- length(nombreL) topC <- length(nombreC) for (i in 1:topL) { for (j in 1:topC) { k <- grep(noquote(nombreL[i]),nombreC[j])

Hello all, The following line of code includes a right-to-left language text, yet the R graphics engine displays it from left to right. One problem this causes is when there are parenthesis in the test, here is a basic example? plot(1:10, main = "שלום (טקסט)") Is there a way to make sure the text is displayed from right to left? Many thanks for any suggestions, Tal

Hello all, I am using R 2.13.0 with windows 7, after giving my user full privileges to the R folder (as described here<http://www.r-statistics.com/2011/04/how-to-upgrade-r-on-windows-7/> ). This allows me to install new packages just fine. However, when using update.packages(), to update existing packages, I keep getting the following error (for example, when updating the MASS package):

Hello all, I recently discovered the "comment" command. I see it can only hold a vector of characters. Is there a way (or an alternative), to make it possible to have it keep a list? (for example, to keep different pieces of information like date of creation, information of each variable and so on) The closest solution I can think of is using 'names' on the vector, like this:

Hello My question is the following. I have tried to find a similar subject in archives but not found (perhaps bad search!) and I tried R-help and I was advised that R-devel would perhaps better for my question So I wonder if it is possible to create a dll from a R code to use it in another language/program. Indeed, one of my colleague wrote a R code combining some R functions to create a

Hi all, I just failed in loading a saved wordspace (13MB of size), and received these errors: Warning: stack imbalance in 'missing', 52 then 51 Warning: stack imbalance in 'if', 50 then 53 Warning: stack imbalance in 'as.environment', 57 then 59 Warning: stack imbalance in 'ls', 54 then 53 Warning: stack imbalance in '.Internal', 54 then 53 Warning: stack

Hello all, I would like some R function that can translate a string to a "URL encoding" (see here: http://www.w3schools.com/tags/ref_urlencode.asp) Is it implemented? (I wasn't able to find any reference to it) Thanks, Tal ----------------Contact Details:------------------------------------------------------- Contact me: Tal.Galili@gmail.com | 972-52-7275845 Read me:

Hello! I'm a college undergrad desperately trying to finish up my thesis. I have a dataset on the distribution of a grassland bird from the Breeding Bird Survey. I have a very straightforward and simple version of the logistic growth model to describe changes in this bird's abundance over time. The variables are the natural birth rate, mortality, and carrying capacity. The equation itself