similar to: Latex and r

Hello. I am posting this on behalf of a student in my class. I have been introducing them to R. I suspect that the problem I need help with is not so much an R issue, but a MAC config issue, but I don't have enough MAC experience to know what to do. Anyway, on to the problem. We are using Frank Harrell's Hmisc and Design packages. This student also wishes to use the latex formatting

On 29 May 2018 at 16:37, R P Herrold wrote: | On Tue, 29 May 2018, Dirk Eddelbuettel wrote: | | > On a CentOS 7 machine, I am at a loss with respect to an inability to run a | > full R CMD check as anything involving tex files ends in tears. | | Hi, Dirk | | Have fun at the upcoming conference at UIC | | I seem to have 56 font packages installed under CentOS 7 | locally, but then I work

Hi, pretty new with R and LaTeX here... I'm trying to use the latex() function from the Hmisc table with Sweave. When I try: pdflatex myfile.tex I get an error that reads: ! Undefined control sequence. l.22 \ctable It seems like this is an optional package for Tex that I haven't installed? My googling skills have neglected to locate instructions for how to install ctable on a Mac,

Hi, The following command: R CMD Rd2pdf --no-preview --output=./tmp.pdf --title=test genefu-package.Rd run against this file: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/genefu/man/genefu-package.Rd (username: readonly; password: readonly) produces a very verbose error (see below) with R version 2.15.0 alpha (2012-03-07 r58622). The .Rd file has these lines in it: Version: \tab

On an new install of Ubuntu 8.10 64bit, I am having trouble with make check-all checking package 'survival' and elsewhere: l.100 \fontencoding\encodingdefault\selectfont ! LaTeX Error: File `kvoptions.sty' not found. Type X to quit or <RETURN> to proceed, or enter new name. (Default extension: sty) ! Emergency stop. <read *> l.2231

Hi all I am trying to build an R package, which I have successfully done many times before, but have an error I cannot trace. I hope someone can help me. Here's is some edited output (full output below if it is useful): pdunn2 at PDunnUbuntu:~/DSdata$ R CMD build GLMsData * checking for file 'GLMsData/DESCRIPTION' ... OK * preparing 'GLMsData': * checking DESCRIPTION

Hi, While using R CMD check I get the following Latex error message which occurs when creating PDF version of manual: LaTex error: File `inconsolata.sty' not found I am using Windows 7 (64-bit) and R 3.0.1. I have MikTex 2.9. I see that the incosolata.sty is present under \doc\fonts folder. How can I eliminate this problem? Thanks, Ravi [[alternative HTML version deleted]]

Hi, I would appreciate some help with a very basic problem in using pgfSweave. That is, dealing with the sweave.sty file. After some googling, I did the following : (1) copied the sweave.sty file to my trial folder and (2) added the line?? \usepackage{Sweave}?? to the Rnw file. Are there more elegant ways of dealing with this issue? I have read something about letting Miktex know about the

On 05/29/2018 04:53 PM, Dirk Eddelbuettel wrote: > I noticed it with a local, not-public package -- but it appears to apply with > any source package. I replicated with pkgKitten straight off CRAN and after > checking that it has a six page manual there. I'm having trouble reproducing this one. In my fresh CentOS 7 VM, I can pull the pkgKitten source down, and run R CMD Rd2pdf

Tom, On 30 May 2018 at 11:34, Tom Callaway wrote: | On 05/29/2018 04:53 PM, Dirk Eddelbuettel wrote: | > I noticed it with a local, not-public package -- but it appears to apply with | > any source package. I replicated with pkgKitten straight off CRAN and after | > checking that it has a six page manual there. | | I'm having trouble reproducing this one. In my fresh CentOS 7 VM, I

Dear all, I am getting an R CMD check warning about the PDF manual. I am having a hard time finding out what is wrong, here is the log of the Rd2pdf call. The full check (and other) log is at https://api.travis-ci.org/jobs/46373922/log.txt?deansi=true if anybody is interested, and the package itself is here: https://github.com/metacran/r-builder/tree/bintex/rbuildertest Thanks, Best, Gabor

I want write article by russian language using Sweave. For cyrillic text LaTeX use T2A encoding \usepackage[T2A]{fontenc} But in Sweave.sty we find: \RequirePackage[T1]{fontenc} It is source of critical problem. For example Rnw file $ cat estimation.Rnw \documentclass[A4paper]{article} \usepackage[T2A]{fontenc} \usepackage[utf8]{inputenc} \usepackage[russian,english]{babel}

Hi, Due to a change in Rd.sty a few days ago (https://github.com/wch/r-source/commit/620eb9a#diff-3bf3d821c6faae50cd6ec931f6f63296L272), the default installation of TeXLive 2009 or 2012 no longer works when building Rd to PDF. The error log is like this: =============== Converting Rd files to LaTeX ..... Creating pdf output from LaTeX ... Error in texi2dvi(file = file, pdf = TRUE, clean = clean,

How exactly to use the tag "Obsoletes:" in a spec file ? I need to offer texlive to users on Centos-5.6, so I packaged it (based on a Mandriva src.rpm), and that works. But I want rpm to *replace* tetex by texlive, instead of just adding texlive, when users do a : $ yum install texlive (we have a local repo here). So I added this line in texlive.spec : Obsoletes: tetex and of

Hello ALL! I am running Fedora 16 x86_64. Due to some dubious problems, that i couldn't resolve, with the TeXLive (2007, which is a default), I removed it. That removed R as well, and some other dependent packages. Then, I installed TeXLive 2011 from CTAN. However, when I wanted to install R, from Fedora's repositories, it asks for some TeX dependencies (for example, tex-preview,

I apologize for abusing the list somewhat but there is some connection to R. Several of the example files in the knitr package for R use the tufte-handout class, which, AFAICS, is not available in Ubuntu or Debian packages (please correct me if I am wrong). The source files are available at tufte-latex.googlecode.com (a.k.a. code.google.com/p/tufte-latex) and I presume they should end up in a

Hi! On Linux I try to produce pdf graphs with computer modern fonts so that they look nice in LaTeX documents. I run for example: ------ CM <- Type1Font( "CM", c("/usr/share/texmf-texlive/fonts/afm/public/cm-lgc/fcmr8a.afm", "/usr/share/texmf-texlive/fonts/afm/public/cm-lgc/fcmb8a.afm", "/usr/share/texmf-texlive/fonts/afm/public/cm-lgc/fcmri8a.afm",

dear R users, I am using sweave to generate report for my data analysis. I recently updated R ro 2.8.0, and now I have the following results when compile the the tex file generated from R. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./Lajos.tex LaTeX2e <2005/12/01> Babel <v3.8h> and hyphenation patterns for english,

Hi, I recently switched from Mac OS X (after 7 years) to Xubuntu 12.04 and I am quite happy with it so far. I first installed R from source but I was somehow missing certain things and I thus decided (after a new Xubuntu installation which I had to make due to other reasons) to install R the "Ubuntu way": ,----[ R installation: ] | 1) sudo emacs /etc/apt/sources.list | 2) add: | deb

Dear R-users, I want to give a try to Sweave and Latex but I am having some problems compiling my .Rnw files within Kile. I have followed the recommendations given in http://tolstoy.newcastle.edu.au/R/e5/help/08/10/4277, but they do not seem to address my particular problem. I am using R 2.11.0 and Kile v 2.0.83 on an OpenSUSE11.2 installation (KDE 4.3 environment). According to the log (see