similar to: Problem with vignette compilation during R CMD check

Dear R-users, I want to give a try to Sweave and Latex but I am having some problems compiling my .Rnw files within Kile. I have followed the recommendations given in http://tolstoy.newcastle.edu.au/R/e5/help/08/10/4277, but they do not seem to address my particular problem. I am using R 2.11.0 and Kile v 2.0.83 on an OpenSUSE11.2 installation (KDE 4.3 environment). According to the log (see

I?m preparing a package (fastR) for submission to CRAN, but the vignette index keeps going AWOL, or at least R CMD check ?as-cran thinks so. I?ve tried several things and gave myself the weekend to think of other things, but I can?t figure it out. Perhaps someone on the list can lend a hand. Here?s one example situation, where I build the index.html file myself and put it in inst/doc/index.html

[Env: Win Xp / StatET 2.0 / R 2.15.0] In my heplots package I extended the HE-examples.Rnw vignette under inst/doc. The package passes R CMD check on my machine: * using log directory 'C:/eclipse-3.7/heplots.Rcheck' * using R version 2.15.0 (2012-03-30) * using platform: i386-pc-mingw32 (32-bit) ... * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files

Hello Does anybody have experience with Sweave run from Kile? I'm trying to make it run but have problems and don't know if the instructions are false or I do something wrong (my knowledge in bash and shell is too low to understand it)... I discovered recently Sweave and wanted to run it from my latex editor, Kile. I found and followed these instructions: > If you want to be able

Hello, I'm seeing three different vignette-related errors with recent versions of R-3.0.0 alpha. First, with the package BitSeq (http://bioconductor.org/packages/2.12/bioc/html/BitSeq.html), I get the following when trying to build the package: Error: processing vignette ?BitSeq.Rnw' failed with diagnostics: Failed to locate the ?weave? output file (by engine ?utils::Sweave?) for

Based on some testing it seems to me that if I have a package with a dataset in /data a Sweave vignette in inst/doc (but no associated pdf file) the vignette loads the data in /data through data(dataset) and I do a R CMD build R will try to build the pdf version of the vignette, but will be unable to find the dataset in data because the package is not yet installed. However, if I do

Hello, I am trying to run "RCMD check" on a package. It performs OK, with the exception of a single warning: * checking package vignettes in 'inst/doc' ... WARNING Package vignette(s) without corresponding PDF: AnnotationFuncsUserguide.Rnw As I understand the problem, the vignette is not built. However, I have no problems in doing so manually. How do I fix this problem? I

I'm adding a couple of vignettes to an existing package. When I make a change to the sweave file, and run the check command, c:\conifers\trunk>R CMD check rconifers I get the following message(s) in the 00check.log file: * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... WARNING Package vignette(s) without corresponding PDF:

I am getting the following problem with make check-all on the June 24 rc. I realize I could probably fix it by installing/setting a path to the sty file, but I don't remember having to do that for make check-all in the past. Paul Gilbert ___________ .... checking package 'Matrix' * checking for working pdflatex ... OK * using log directory

In a package I'm working on there is a vignette with a number of graphs that result in huge .pdf files, so the .pdf for the vignette is around 17 Mb. If these graphs are converted to .png, and the .tex file is compiled with pdflatex, the resulting .pdf is ~1 Mb. I'm reluctant to put the .Rnw file into the package as is, generating the huge .pdf for the vignette. I first tried

I am looking for a way to generate .Rout.save files for vignettes. The manual "Writing R Extensions" states here [1] in item number 20: "If there is a target output file .Rout.save in the vignette source directory, the output from running the code in that vignette is compared with the target output file." Yet, there is no pointer on how to get the correct .Rout.save files

Dear R-specialists, I am trying to create a Makefile that will first convert all my .Rnw files into .tex files and then, that will run the LaTeX compiler to produce a pdf document. This issue has been discussed before. Hence, I've basically adapted a Makefile I found at http://n4.nabble.com/R-Sweave-R-and-complex-latex-projects-td810020.html#a810023 to make it compatible with a Windows

I see there have been a number of tweaks to the document build recently (87650, 87654, 87658, 97660, 97661, etc.) I tried building 87668 today on Windows 10 and received the error below. Is this related? Thank you, Avi building/updating vignettes for package 'grid' ... processing 'displaylist.Rnw' Error: compiling TeX file 'displaylist.tex' failed with message: pdflatex

Hello, I have the following makefile. The problem is that the bibliography doesn t work. Any help would be appreciated! I really don t don t what to do..:-( # The sources of the report (tex, Rnw and other files (e.g. bib, idx)) TEX_CMPS = Report problem RNW_CMPS = prop1 prop2 ExeExps OTHER = Report.bib # The name of the report to produce all: Report.pdf code: $(RNW_CMPS:=.R) clean: rm

Dear all, In my package I have a computational expensive Rnw file which can't pass R CMD check. Therefore I set eval=FALSE in the Rnw file. But I would like to have the pdf vignette generated by the Rnw file with eval=TRUE. It seems to me a static pdf vignette is an option. Any suggestions on this? Thanks, Zhu Wang **Connecticut Children's Confidentiality Notice** This e-mail

below is a very simple bash script to run Sweave from a cygwin terminal, run pdflatex on the generated .tex file, and then view the resulting .pdf output. i usually use cygwin when i am (forced to be on) Windoze, but i found a few issues with paths that this script works around. pdfview, used in the script, is simply:

The builder runs tools::texi2pdf() on the vignettes. Does that give the same error for you? Do earlier revisions work? Duncan Murdoch On 2025-01-29 2:20 p.m., Avraham Adler wrote: > I see there have been a number of tweaks to the document build > recently (87650, 87654, 87658, 97660, 97661, etc.) > > I tried building 87668 today on Windows 10 and received the error > below. Is

Hi, Let me start with wishing you all the best for this new year, and I hope we'll see a lot of new features and not so much new bugs ;-) I'm trying to convert a number of PSTs to maildir. Just plain drag&drop in Outlook doesn't work (gives a very cryptic error message in a certain folder, but that folder is perfectly all right), and using the import option also barfs when

I'm having trouble with R CMD check of my quantreg package. All is well until I get to: checking running R code from vignettes ... ?rq.Rnw? ... failed ERROR Errors in running code in vignettes: when running code in ?rq.Rnw? when I see a snippet from the vignette code and then: Loading required namespace: MatrixModels When sourcing ?rq.R?: Error: could not find function

Am 29.01.25 um 20:20 schrieb Avraham Adler: > I see there have been a number of tweaks to the document build > recently (87650, 87654, 87658, 97660, 97661, etc.) To Rd2pdf, yes, mostly bug fixes for some rare usages. Some more changes are in the making, also for texi2pdf (but that has not been touched yet). > > I tried building 87668 today on Windows 10 and received the error >