similar to: Installling source package

Hello All I have some problem for installing XML_2.6-0.tar . I am working in widows and R version is R-2.9.1 >*install.packages("XML")* After selecting a CRAN mirror ** *Error :-* Warning: unable to access index for repository http://cran.pt.r-project.org/bin/windows/contrib/2.9 Warning: unable to access index for repository

Dear R-Help My OS is Windows CP, I'm not sure my sessionInfo() is relevant but here it is: R version 2.10.1 (2009-12-14) i386-pc-mingw32 locale: [1] LC_COLLATE=English_United Kingdom.1252 LC_CTYPE=English_United Kingdom.1252 LC_MONETARY=English_United Kingdom.1252 [4] LC_NUMERIC=C LC_TIME=English_United Kingdom.1252 attached base packages: [1] stats

Dear all, I'm trying to create my own package by following for instance http://epub.ub.uni-muenchen.de/6175/2/tr036.pdf In step 6 (page 19) it says that the command 'R CMD build <mypackage>' should result in a tar.gz file. However, after running the command I end up with a tar file only (no gz extension). I also get the following warnings in the command prompt C:\Program

Hi, Gordon Smyth brought the following problem to my attention. PROBLEM/"BUG": Using R v1.9.0 alpha for Windows and the latest Rtools from Brian Ripley you get the following problem trying to R CMD build a package (or a bundle); >R CMD build R.basic * checking for file 'R.basic/DESCRIPTION' ... OK * preparing 'R.basic': * checking whether 'INDEX' is

Hello all and happy new year !!! I had a package that worked fine but since I switched to R 2.15.2, It is not compatible anymore (I have the error message: not installed for 'arch=i386'). I have therefore updated Rtools 2.16 and Path variables as follow: PATH=C:\Rtools\bin;C:\Perl\bin;C\Rtools\MinGW\bin;C:\PROGRA~1\R\R-2.15.2\bin\i38

I am trying to build a windows 32 bit version of R 2.11.0 from source on a machine running windows 7 - 64 bit while running as the machine's administrator. I am able to run "make all recommended"...However, once I attempt to build the bitmap files I get the following: C:\Rsource\R-2.11.0\src\gnuwin32>make bitmapdll make -C bitmap make[1]: Entering directory

Dear list, since I have upgraded openOffice to version 3.2 I have some trouble to open very simple ODT files generated by odfweave: the file is apparently corrupted (but recovery is fine). I have observed this under windows and mac OS 10.4.11 with R 2.10.0, odfWeave_0.7.11, XML_2.6-0, lattice_0.17-26. However, I found nothing similar by RSiteSearching so that I'm suspecting a localization

On 11/03/2015 3:09 PM, Dan Tenenbaum wrote: > > ----- Original Message ----- > > From: "Duncan Murdoch" <murdoch.duncan at gmail.com> > > To: "Dan Tenenbaum" <dtenenba at fredhutch.org> > > Cc: r-devel at r-project.org > > Sent: Wednesday, March 11, 2015 12:06:48 PM > > Subject: Re: [Rd] Notes on building a gcc toolchain for

Dear developers, I am trying to run some C/ Fortran code in R. Although I have experience with that in Windows (Vista) 32 bit, I could not succeed in 64 bit. I downloaded the following: - R 2.12.0 - Rtools 212 - miktex 2.9 - inno setup 5 -Afterwards, I changed the path as: ?C:\Program Files\R\R-2.12.0\bin;C:\Rtools\bin;C:\Rtools\MinGW64\bin;C:\Program Files\HTML Help Workshop;C:\Program Files

Full_Name: David Firth Version: 1.2.3 OS: Windows NT4 Submission from: (NULL) (163.1.103.107) Two things that look like bugs: 1. RCMD INSTALL does not seem to cope with quotes in the Windows path. With my path set to PATH="C:\R\Rtools";"C:\R\rw1023\bin";C:\Perl\bin\;C:\WINNT\system32;C:\WINNT;C:\ mingw2\bin I get, for example, C:\R>RCMD INSTALL boot RCMD

Dear friends, I am building an R package called *mypackage*. I followed every possible steps (to my understanding) for the same. I got following problem while doing *R CMD check mypackage*. * installing *source* package 'mypackage' ... ** libs cygwin warning: MS-DOS style path detected: C:/PROGRA~1/R/R-213~1.0/etc/i386/Makeconf Preferred POSIX equivalent is:

Hi, After uninstalling Rtools 2.14.0, I have installed the latest version of Rtools 2.15.0 which gives the two folders C:\Rtools\bin C:\Rtools\gcc-4.6.3 R is installed in the directory C:\R\R-2.15.0 I have set the Environment Variable PATH=c:\Rtools\bin;c:\Rtools\gcc-4.6.3\bin;c:\R\R-2.15.0\bin;<others> I am trying to install a custom package (BMEA_0.2.1) which is exactly

Hi, I built a package in linux and would like to use it in windows. I cant build the package again in windows because it would miss the necessary libraries etc(I'm using Rcpp). So I need to generate a binary version and try to install it in windows. I tried this and I get the error /cygdrive/RTools/bin/cp: target 'xf->>' is not a directory Can someone help me with this? --

Hello all, I was trying to compile a simple C program hello.c using R CMD SHLIB hello.c. MY R software residing in C:\Program Files\R\R-2.15.0, and also I have downloaded the Rtools 2.15.0 and it is in C:\Rtools, MY file(hello.c) is in E:\R_dir. I have followed the procedures given below 1. In a new CMD.exe window I have set the path as c:\ Rtools\bin; C:\Rtools\MinGW\bin;C:\Program

Hello, I'm trying to build a simple cpp file using the R CMD SHLIB command and I always receive the same error message: cygwin warning: MS-DOS style path detected: C:/PROGRA~1/R/R-212~1.1/etc/i386/Makeconf Preferred POSIX equivalent is: /cygdrive/c/PROGRA~1/R/R-212~1.1/etc/i386/Makeconf CYGWIN environment variable option "nodosfilewarning" turns off this warning. Consult

I am attempting to analyze Affymetrix exonchip data using the exon map package. I have installed this package but have had problems installing the associated programs, specifically RMySQL since no windows binary exists. I have followed the directions for compiling the package as found on - http://biostat.mc.vanderbilt.edu/wiki/Main/RMySQL - but still have an error when executing the

I've upgraded laptops and have put a new version of R on the new machine as well as the tools for building packages. I know R has required a "non-broken" version of tar for some time now and was hoping to not have to install any cygwin tools. Since building packages requires the use of MinGW and MSYS, why can't we simply use the tar that's part of msys? After looking at

Hi, I'm trying to get data from web page and modify it in R. I have a problem with encoding. I'm not able to get encoding right in htmlTreeParse command. See below > library(RCurl) > library(XML) > > site <- getURL("http://www.aarresaari.net/jobboard/jobs.html") > txt <- readLines(tc <- textConnection(site)); close(tc) > txt <- htmlTreeParse(txt,

My setup: Windows XP, R-2.6.0, Cygwin (not the Rtools version) When I tried to build a package, I was given this message: tar: c\:/X/Rpkgs/Drydown_1.41.tar: Cannot open: Input/Output error Even manually typing the following caused the same error: tar chf 'c:/X/Rpkgs/Drydown_1.41.tar' Drydown I looked at the 2.5.1 and 2.6.0 build scripts. After restoring this section to the 2.6.0 build

At a Windows command prompt: C:\>which ls /cygdrive/c/Rtools215/bin/ls C:\>which perl /cygdrive/c/perl/bin/perl In R: > Sys.which(c("ls", "perl")) ls perl "c:\\RTOOLS~3\\bin\\ls.exe" "" Is this expected behavior? > sessionInfo() R Under development (unstable) (2011-10-28