similar to: trouble with installing pbatR

On Fedora Core Linux 4, I have a cron job that causes R to update all packages and install new ones. Lately, I notice in the log that some packages fail to install. These are ones that assume X is running. For example, the pbatR install requires tcltk to be loaded, and then the install fails because in a cron job, there is no DISPLAY environment. I suppose the same happens if you try to

On Fedora Core Linux 4, I have a cron job that causes R to update all packages and install new ones. Lately, I notice in the log that some packages fail to install. These are ones that assume X is running. For example, the pbatR install requires tcltk to be loaded, and then the install fails because in a cron job, there is no DISPLAY environment. I suppose the same happens if you try to

Dear All, Does anybody have experience with R package pbatR (http://cran.r-project.org/web/packages/pbatR/index.html)? I am trying to use it to analyze the family-based case-control data, but the package totally doesn?t work on my computer. I contacted the authors of the package, but I haven?t heard anything from them. Following the package manual, I tried the simple example as below:

R2WinBUGS users, I'm getting the error message "monitor could not be set" when I try to monitor (and output to R) a response variable that includes missing data (NAs)...ie.e imputing for y. Setting monitors for other parameters works OK and running the R-generated WinBUGS script file in WinBUGS, also works OK. Below is my R code and the log.txt file output by R2WinBUGS. As I want to

On 06/10/2020 11:00 a.m., Sorkin, John wrote: > Colleagues, > I am trying to learn to use uniroot to solve a simple linear equation. I define the function, prove the function and a call to the function works. When I try to use uniroot to solve the equation I get an error message, > Error in yfu n(x,10,20) : object 'x' not found. > > I hope someone can tell we how I can fix

Colleagues, I am trying to learn to use uniroot to solve a simple linear equation. I define the function, prove the function and a call to the function works. When I try to use uniroot to solve the equation I get an error message, Error in yfu n(x,10,20) : object 'x' not found. I hope someone can tell we how I can fix the problem

hi there, trying to follow the steps of Yan & Rossini 2003, I have two problems : first when I 'make CrossCompileBuild', I get : ****************************************************************************** make[1]: Entering directory `/home/ros/RWORK/CROSSSOMP/WinR/R-1.8.0/src/gnuwin32' make -f Makefile.docfiles make[2]: Entering directory

Dear List, I have just compiled my first R library for submission to CRAN; however, I have a tiny problem with 'R CMD check' that is holding me back. I have read extensively the PDF document on Writing R Extensions and the 'Making R Packages Under Windows' tutorial by P. Rossi. All functions are given in R code (no C/C++/Fortran) with two very simple demonstration datasets. My

Hi, I am trying to work with the output of the MINE analysis routine found at http://www.exploredata.net Specifically, I am trying to read the results into a matrix (ideally an n x n x 6 matrix, but I'll settle right now for getting one column into a matrix.) The problem I have is not knowing how to take what amounts to being one half of a symmetric matrix - excluding the diagonal -

Hello, I am a newbie. I can run the following code stored in "test.txt" without error using my XP machine: x <- scan("C:\\Rwork\\A.txt") x10 = filter(x, rep(1/10,10), sides=1) x x10 for(i in 10:length(x)){ if (x[i] > x10[i]) diff[i]="b" else diff[i]="s" } However, if I run it in another PC that uses Windows 7, the following error occurs:

Hello, I'm trying to put a dynamic table and a dynamic graph side by side in a pdf document using Sweave. The data.frame used to generate the table is called rg (rg.txt): "Date"; "Code"; "Data1"; "Data2" "2009-03-10";"1";1958;147 "2009-03-10";"2";302;144 "2009-03-10";"3";4;141

This is a multipart message in MIME format. --=_alternative 00812CFCCA256D66_= Content-Type: text/plain; charset="us-ascii" Two points in respect to PR#2867. First, the trivial one: (1) In Lapack.c, on lines 806 and 812, there are calls of F77_CALL(dgeqp3). But the error messages on lines on lines 809 and 815 refer to "dqeqp3", i.e., they currently have a "q"

In trying to install the pbatR package, I was greeted with the error Error: package 'tcltk' does not have a name space Execution halted Directly installing the package tcltk2 returned the following error: Loading required package: tcltk Error in firstlib(which.lib.loc, package) : Tcl/Tk support is not available on this system I have seen from previous posts that tcl/tk must be

Dear WizaRds, I wrote a small function in R and would like to create a package. The necessary documentation is done, Rtools etc. are installed and I am still unable to complete the process under Windows. I did extensive research in the archives and read the Murdoch-Sutherland website on the Rtools and MikTeX hints. I realize that I understand only half or less of what is said there

Dear all, i was working under R 1.6.2 but i wanted to install bioconductor under WinXP, and because R 1.7.1 contains the TclTk package and automatic installation of bioconductor packages, so i install it. Everything is fine except this message which appear after the installation of packages. "> local({a<- CRAN.packages(CRAN=getOption("BIOC")) +

Hi, I am trying to run the "schools" example in the rbugs library (running winbugs in linux via wine-20041201) but keep getting the following error. Note I have tested wine and winbugs to confirm that both are operational. Error in runBugs(bugs, script.file, n.chains, workingDir, useWine, wine, : BUGS stopped before getting to coda. The command I'm using is:

Hi, I recently discovered the R program and I thought it could be useful to me. I have to analyse data saved as .Px file (x between 0 and 8 - .P0 files have 18 lines at the beginning that I have to skip). New files are generated everyday. This is my strategy : In order to analyse the data, I first want to copy the new data in a database in MySQL (which already contains the previous data). So

** High Priority ** I have been trying to read an SPSS file into R using read.spss ("C:/Documents and Settings/Roderick Harrison/My Documents/RWORK/ihisdat.sav", use.value.labels = TRUE, to.data.frame = FALSE, max.value.labels = 500, trim.factor.names = FALSE, trim_values = TRUE, reencode = NA, use.missings = to.data.frame) Each time (at least 5 or 6 by now) I get the following

Hi, Having trouble loading tcltk in R 2.2.1 built from source. ./configure, make, make check, and make install run ok. > library(tcltk) Error in firstlib(which.lib.loc, package) : Tcl/Tk support is not available on this system Error in library(tcltk) : .First.lib failed for 'tcltk' even though it is listed in library() output. I have the same problem even if i compile

Hi, I'm try to use the SJava package. The install is OK. In R I have this error message: -------------------------- > library(SJava) Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library "/opt/lib/R/site-library/SJava/libs/SJava.so": libRSNativeJava.so: cannot open shared object file: No such file or directory Error in