similar to: kalaiinfo@gmail.com

We have R 2.2.1 installed on a Linux cluster that seems to have problems loading either of our shared object libraries for packages. This seems to be happening on both local and global versions of packages that we install. However, we have only noticed this problem in the past 3 months on this R installation, whereas some users had success before then. It could be that something on our system

Re-sending this from 10/7. Please help! I'm really clueless how to fix this: System: Solaris 7, Software: R_1.7.1 for unix > R CMD INSTALL -l /Rdir/library haplo.stats_1.1.0.tar.gz -works like a charm-- no syntax errors, etc But problems are when I'm loading the library within R. > library(haplo.stats, lib.loc="/people/biostat3/sinnwell/Rdir/library") > Error

Hi all, Hope someone can help me. I start out with a matrix called haplo with 600 rows and two columns. To start with, the elements of the matrix are character strings of 20 numbers. I then want to create separate objects, called ha1-ha600, that are the concatenated 20 + 20 numbers, as numeric. I am having no trouble doing anything except getting the index i to paste to the object ha(i) in

Hi all, I have a R script that creates several input files for an analysis program. It loops through the matrix read into R and picks out submatrices and then creates a separate output file for each submatrix. The loop works great, but I am having trouble getting all the separate output files written. The line I have is: write.table(ch1d,

Hi, Anybody knows a function that can fit haplotype data to a Cox model. I've been searching it in the web without succeed. I use "haplo.stats" package, but unfortunatelly it's not possible to analyse survival data, amb I right?. Thanks in advance. Isaac Subirana (isubirana@imim.es) [[alternative HTML version deleted]]

Sehr geehrte Damen und Herren, hiermit m?chte ich bei Ihnen nachfragen, ob die f?r Splus geschriebene "haplo.score"- Funktion auch unter R verwendet werden kann. siehe http://www.mayo.edu/statgen/software/ Wenn ja, wie sind die Aufrufe Splus CHAPTER -m und Splus make in R zu realisieren? Herzlichen Dank f?r Ihre M?he mit freundlichen Gr??en -- Dr. rer. nat. Andreas Fr?hlich

Playing a bit with todays linux-next on my jetson, it seems this patch is still required for enabling the GPU. Is there anything blocking it (firmware not available yet in liux-firmware?) On Mon, May 19, 2014 at 06:24:10PM +0900, Alexandre Courbot wrote: > Signed-off-by: Alexandre Courbot <acourbot at nvidia.com> > --- > arch/arm/boot/dts/tegra124-jetson-tk1.dts | 8 +++++++- >

On Thu, Sep 25, 2014 at 09:48:01AM -0600, Stephen Warren wrote: > On 09/25/2014 07:27 AM, Sjoerd Simons wrote: > >Playing a bit with todays linux-next on my jetson, it seems this patch is > >still required for enabling the GPU. Is there anything blocking it (firmware > >not available yet in liux-firmware?) > > I think initially I was waiting for the DRM patch

I upgraded from Fedora Core 4 to Fedora Core 5 and I find a lot of previously installed packages won't run because shared libraries or other system things have changed "out from under" the installed R libraries. I do not know for sure if the R version now from Fedora-Extras (2.2.1) is exactly the same one I was using in FC4. I see problems in many packages. Example, Hmisc: unable

On 07/29/2013 06:28 AM, Matt Fleming wrote: > On Fri, 26 Jul, at 09:49:28AM, H. Peter Anvin wrote: >> Hmm... this might constrain the heap excessively if the SMT_TERMINAL >> cutoff is at the wrong place (because there will be just enough SMT_FREE >> to fit.) I'm wondering if we shouldn't use the highest of these two >> regions. > > Could you give an

haplo.stats, version 1.5.2, is now available on CRAN. Below I provide the description and link to our software page where you can also find the updated user manual. The most notable updates for this version were to make the haplo.glm fitted object work more like the glm object; other changes are listed in the NEWS file entries pasted below. DESCRIPTION: haplo.stats: Statistical Analysis of

haplo.stats, version 1.5.2, is now available on CRAN. Below I provide the description and link to our software page where you can also find the updated user manual. The most notable updates for this version were to make the haplo.glm fitted object work more like the glm object; other changes are listed in the NEWS file entries pasted below. DESCRIPTION: haplo.stats: Statistical Analysis of

I am on Solaris 7, using R_1.7.1 developing packages for both Splus and R. We have a working R-package for haplo.score and now converting to haplo.stats. R CMD INSTALL -l /people/biostat3/sinnwell/Rdir/library haplo.stats_1.1.0.tar.gz works like a charm-- as comparable to our working version of haplo.score. But problems are when I'm loading the library within R. Within my package I have

Dear all, I have a datafile where I run haplo.GLM analyses using several variables (a matrix). However, when I include a certain binary variable (0,1) I get this message Error: NA/NaN/Inf in foreign function call (arg 4) I don't get an error when I include another binary variable, again with only 0,1. Both variables don't have missing values, they only have 0 and 1. Why do I get an

"Recursive default argument reference" keeps appearing when I try to run a haplo.score function in R for Windows. I'm new to using this program. Does anyone know what this means? --------------------------------- [[alternative HTML version deleted]]

Hi, My query is regarding permutation test and reshuffling of genotype/phenotype data I have been using the haplo.stats package of R. for haplotype analysis and I would like to perform an analysis which I'm requesting your advice. I have a data set of individuals genotyped for 12 SNP and a dichotomous phenotype. At first, I have tested each of those SNP independently in order to bypass

Hi, there, I cannot get accurate value for calculation. for example: ld<-sqrt(1*0.05*0.95*0.05*0.95) 0.05*0.95-ld=-6.938894e-18 0.05*0.95-ld==0 is False. I met this problem in my program, how can I handle it. Thanks. xj.

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Dear colleagues, I face a problem doing haplotype analyses with haplostats: when I use the haplo.em function, the programme gives an error message because of 'recursive default argument reference.' I am not able to figure out what this means. Could you perhaps help me? The full output is the following: > library(haplo.stats) >

I've just uploaded an R version of Daniel Schaid's 'haplo.score' library (from http://www.mayo.edu/statgen/) to CRAN. >From the DESCRIPTION file: [haplo.score is a] suite of routines that can be used to compute score statistics to test associations between haplotypes and a wide variety of traits, including binary, ordinal, quantitative, and Poisson. These methods assume