similar to: bargraph.ci - CI and color question.

Hi to all, Does anybody knows why this is giving an error? data(ToothGrowth) # Two-way design with options bargraph.CI(dose, len, group = supp, data = ToothGrowth, xlab = "Dose", ylab = "Growth", cex.lab = 1.5, x.leg = 1, col = "black", angle = 45, cex.names = 1.25, density = c(0,20), legend = TRUE) Error in dn.call[[1]] :

I'm trying to create a bargraph of means with standard error bars using the function bargraph.CI (in the sciplot package). Like this: bargraph.CI(x.factor, response,data,xlab, ylab, par(family="serif"),font=11) However, an error message comes up when I try to use the par funtion. Does the character font/style need to be changed in a different way for this kind of plot? Or am I

Hi there, I am a beginner. I would like to change the error bars in the bargraph.CI function from the default (se) to (sd). The help file says ci.fun= function(x) c(fun(x)-se(x), fun(x)+se(x)) Is there a simple way of telling the function what (x) precisely is - I already define in in the of the bargraph.CI function and assume that is should be able to use that information. cheers, Herwig --

Hi there, I wonder if anyone can help me. I'm trying to use bargraph.CI in the Sciplot package when there is a missing combination of the factor levels. Unfortunately the standard errors on the plot do not appear to be correct. Consider an analysis consisting of two factors A and B. When all factor level combinations are present all appears fine: library(sciplot) #all data

hi List and Manuel, I have encounter the following problem with the function "lineplot.CI".? I'm running R 2.10.1, sciplot 1.0-7 on Win XP.? It seems like it's a scoping issue, but I couldn't figure it out. Thanks! ...Tao > lineplot.CI(x.factor = dose, response = len, data = ToothGrowth)??? ## fine > lineplot.CI(x.factor = dose, response = len, data = ToothGrowth,

Hello: I'm having quite a bit of difficulty adjusting the x-labels using bargraphCI. I've tried using text and srt=45 to rotate the labels or mtext for 2 lines to break up the labels. However, using either method, I cannot line up the labels with the midpoints of the bars (they line up with some sort of tick mark that is off the midpoint of the bars). Any suggestions would be greatly

Is it possible to add standard error bars to the means on interaction plots? Thanks Murray -- Murray Pung Statistician, Datapharm Australia Pty Ltd 0404 273 283 [[alternative HTML version deleted]]

Hello, I'm trying to sort my bargraph.CI plot (function like barplot in the SCIPLOT package) by the mean of the response variable. Does somebody have a trick for it. Thank you. Romain Mayor, PHD student.

Hello, I'd appreciate a suggestion on how to construct plots (barplots?) that use means on the Y axis instead of density/count. I'd also like to use groups and plot error or confidence interval bars on these graphs. I know this is a read the manual situation. I'd appreciate help with what to read, or your benevolence with some sample code. I've looked at lattice and gplots2, but

Hi List, I have a problem plotting data using the lineplot.CI command in the sciplot package. I want to plot the data of 2 experimental cases using different lines (traces). Time is on the X-axis. The tricky thing is that the data collection in the second case started later than for the first case. This is to say: the first n data points for the second case are missing. So far so good. However,

Dear R-lister I have a question about how to create multiple error bar plots. I found that I can use an "errbar" function from Hmisc package to create one error bar plot in which there are multiple data points (x, y) with the error bars. Thus, I know that I can get "one" error bar plot which consists of many data points. However, I did not find a way to put

I'm trying to use the pictex driver for bargraphs, and the shading isn't showing up. Is there any way to get some sort of shading in the plots? A hatch or stipple would be fine, too; just some way to differentiate the bars. The postscript driver won't do, since I'm trying to embed this in a LaTeX document which I'll use pdflatex on and \includegraphics for pdftex doesn't

Dear R list, It appears that my request from yesterday got a bit garbled. I have tried to rephrase and retype it - please let me know if you can help me - I am having some trouble drawing a bar-graph with two groups, both of which are stacked. I would like to plot the conservation status according to two classifications (i.e. my groups - IUCN status and national status), and for each of those

Hi, Can anyone help with plotting vertical error bars on a bar graph. I have tried following examples online and in the big R book and writing my own function but I have been unsuccessful and don’t really have an understanding of what it is I am doing. I have calculated my standard errors so basically just need to draw the bars on the graph but just don’t have a clue!!! I don’t even know what

Hi, I would like to have lineplot.CI and barplot.CI to actually plot confidence intervals , instead of standard error. I understand I have to use the ci.fun option, but I'm not quite sure how. Like this : > qt(0.975,df=n-1)*s/sqrt(n) but how can I apply it to visualize the length of the student's T confidence intervals rather than the stdandard error of the plotted means

Hi, I want to plot means with standard deviations of Total Nitrogen (TN) across 4 stations (S1-S4) and over 3 years (2007-2009). I want this plot in one panel. I do not want medians (bwplot, boxplot). I have tried a few different packages and it seems that ggplots with plotmeans was the fastest (I am not extremely skilled in writing my own scripts). Unfortunately, there is no grouping

Dear R community, I am a beginner using the sciplot package to graph barplots. I would like to be able to graph two x factors (Sampling.year and Period). Sampling.year: 2006, 2007, 2008, 2009 Period: First, Second, Total The parameter "group" is the different species I looked at. They can be seen in the legend. The parameter "response" is the Average percentage

Dear all How does one resolve the variance between the actual availability of data sets in the default implementation with those mentioned in the documentation? I am unable to attach some of the datasets, even though help() is available for the same datasets. For example, "ToothGrowth" is a dataset that is widely mentioned in the documentation as being part of the base install.

Hi folks Run; > ToothGrowth > attach(ToothGrowth) > toothgrowth=lm(len~dose) adding abline: > abline(toothgrowth) I got it done adding single abline. How to add more ablines on the same diagram? I found following thread, applying "mapply" command; Plotting multiple ablines http://www.mail-archive.com/r-help@r-project.org/msg51543.html mapply(abline, (converge$kY +

Thank you for your guys reply for my previous question. But I got one more question about the boxplot. With the code in the R-help: boxplot(len ~ dose, data = ToothGrowth, boxwex = 0.25, at = 1:3 - 0.2, subset = supp == "VC", col = "yellow", main = "Guinea Pigs' Tooth Growth", xlab = "Vitamin C dose mg", ylab =