similar to: Help using substitute and expression functions

Hi R Users, I do have very big data sets and wanted to run some of the analyses many times with randomization (1000 times). I have done the analysis using an example data but it need to be done with randomized data (1000 times). I am doing manually for 10000 times but taking so much time, I wonder whether it is possible to perform the analysis with creating a loop for many replicated datasets?

Hi all. I have a re-occuring typical problem that I don't know how to solve efficiently. The situation is the following: I have a number of data-sets (A,B,C,...) , consisting of an identifier (e.g. 11,12,13,...,20) and a measurement (e.g. in the range 100-120). I want to compile a large table, with all availabe identifiers in all data-sets in the rows, and a column for every

Hi, R 2.5.0 isn't auto-completing paths properly as it used to. E.g. suppose I have: > dir("CEL/choe") [1] "chipC-rep1.CEL" "chipC-rep2.CEL" "chipC-rep3.CEL" "chipS-rep1.CEL" [5] "chipS-rep2.CEL" "chipS-rep3.CEL" Now if I do: ReadAffy("CEL/choe/ch<tab> # => ReadAffy("CEL/choe/chip

Hi, I have sort of a newbie question. I've seriously put a lot of effort into how to handle simple replicates in a repeated ANOVA design, but haven't had much luck. I really liked reading "Notes on the use of R for psychology experiments and questionnaires", by Jonathan Baron and Yuelin Li ( http://www.psych.upenn.edu/~baron/rpsych/rpsych.html ) but still didn't run across

Hi all, I have a rather peculiar dataset that I'm not sure how to model properly. This is data from an instrument that measures the size of particles but instead of giving a continuous value, it generates a "histogram" of the counts for a particular bin size. So the data looks like this: Condition 1 Condition 2 Dimension Rep1.A Rep1.B

Dear friends, I have a data set with 23 columns and 38000 rows. It is a panel running from the years 1991 through 2005. I want to aggregate the data and get the medians of each of the 23 columns for each of the years. In other words my output should be like this Year Median 1991 123 1992 145 1993 132 etc. The sample lines of code to do this operation is set1 <-

I am trying to merge two data frames, but one of the column headings are different in the two frames. How can I rjoin or rbind the tho frames? Johnny # Generate 2 blocks by confounding on abc d1 <- conf.design(c(1,1,1), p=2, block.name="blk", treatment.names = c("A","B","C")) d2 <- conf.design(c(1,1,1), p=2, block.name="blk",

I had forgotten to set the permissions on the upload folder on the remote server. Once I set the perms correctly, it worked. Thanks to everyone for the help! -----Original Message----- Here's my command copied from a shell script:\ rsync --verbose --progress --stats --compress --rsh=/usr/bin/ssh --recursive --times --perms --links \ /home/* trt@xxxxxx.xxxxxxx.xxx:/remotebackups/

Here's my command copied from a shell script:\ rsync --verbose --progress --stats --compress --rsh=/usr/bin/ssh --recursive --times --perms --links \ /home/* trt@xxxxxx.xxxxxxx.xxx:/remotebackups/ Here's some (a small part) of the output: jk/.recently-used 253 100% 0.00kB/s 0:00:00 rsync: recv_generator: mkdir "jk/.secpanel/.runfiles": Permission denied (2) stat

Hello, Banging my head against a wall here ... can anyone light the way to a pattern modification that would make the following TRUE? identical( grep( "^Intensity\\s[^HL]", c("Intensity","Intensity L", "Intensity H", "Intensity Rep1")), as.integer(c(1,4))) Thank you for your time. Sincerely, Joh

Earl F. Glynn asks: > -----Original Message----- > From: r-help-bounces at stat.math.ethz.ch [mailto:r-help-bounces at stat.math.ethz.ch] On Behalf Of Earl F. Glynn > Sent: Tuesday, 15 August 2006 8:44 AM > To: r-help at stat.math.ethz.ch > Subject: [R] Help with workaround for: Function '`[`' is not in thederivatives table > > # This works fine: > > a <- 1

The following is a data frame > "jjd" <- structure(list(Observations = c(6.8, 6.6, 5.3, 6.1, 7.5, 7.4, 7.2, 6.5, 7.8, 9.1, 8.8, 9.1), LevelA = structure(c(1, 1, 1, 1, 2, 2, 2, 2, 3, 3, 3, 3), .Label = c("A1", "A2", "A3"), class = "factor"), LevelB = structure(c(1, 1, 2, 2, 1, 1, 2, 2, 1, 1, 2, 2), .Label =

I'd like to create a data frame with components > jk$x1 [1] 2 > jk$x2 [,1] [,2] [1,] 0 0 I used to be able to do it with > jk <- data.frame(x1=2,x2=I(matrix(0,1,2))) But now I get a error message. Can I still do what I want? Thanks for any help. Chong Gu -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list --

*Hi guys.. i got this type of error when i configured Gemfile then what to do?* gem "thinking-sphinx" gem ''ferret'' Updating git://github.com/mark-moseley/linecache Fetching gem metadata from https://rubygems.org/....... Fetching gem metadata from https://rubygems.org/.. Resolving dependencies... Using rake (10.0.3) Using ClothRed (0.4.1) Using RedCloth (4.2.9)

> -----Original Message----- > From: speex-dev@xiph.org [mailto:speex-dev@xiph.org] > Sent: Sunday, May 11, 2003 11:26 PM > To: jk@pageshare.com > Subject: Please confirm your message > > > Hello, this is the mailing list anti-spam filter at Xiph.Org. > We need you to confirm your e-mail message with the subject of > "Using speex.". > > Please

I'm still having trouble getting to grips with time classes. I wish to calculate the difference in days between events. Browse[1]> insp.j$First [1] "2002-02-19 13:00:00 NZDT" Browse[1]> spray.j$Date [1] "2001-11-29 13:00:00 NZDT" Browse[1]> insp.jk - spray.j$Date Time difference of 82 days If I save insp.jk to a vector, I get a nice useful value of 82.

i have a list of users that I?ve removed from LDAP and I want to delete their mail storage. sdbox Dovecot 2.2.15.8 I have mail messages in one location and indexes in another. Should I just rm -rf /messages/<username> rm -rf /indexes/<username> Thanks, JK ----------------------------------------------------------------------- John "JK" Krug System Administrator The

Hi, So I'm going to be upfront about this: I don't know how to fix this problem or even who to talk to. I've tried the JK community, #winehq, #ati, and even the ATI forums, but no there was help to be offered. Here's the problem... Playing Jedi Knight: Dark Forces II (http://appdb.winehq.org/objectManager.php?sClass=application&iId=122) on Wine, I get such horrid framerates

Hello R experts: When I tried to read my data into R, it does not take # sign A subset of Exp.txt is: Experiment name assay id Varname (A1)DBA TPA 6h/DBA Acetone rep1(A1) #3 4090 A90C1 (A2)DBA TPA 6h/DBA Acetone rep2(A2) #3 4091 A91C1 The command is: Exp <- read.delim2("Exp.txt",check.names=F,as.is=T) It is excuted but gave me all the NAs. Can you all drop me a hint? Thanks

Dear friends I am not sure that I am conducting this analysis correctly. I would really appreciate if someone can verify what I've done. I conducted repeated measures ANOVA for some bugs data. These bugs were measured repeatedly over 32 weeks at the same trapping plots. I want to test a full model for the effect of time ("week") (the "within subject" variable), and the