similar to: Unable to use jpeg(), png() etc.....

Hi, Is there a mean to automatically choose one version of the 'rbind' function ? By default, R chose the 'rbind' from {base}, i would lke to use the one from {IRanges}... Is it possible to set that using 'par' ? > ?rbind Help on topic 'rbind' was found in the following packages: Package Library IRanges

Hi, I am a little lonely as R users in my group. So, I would like to know which editor is the most used in the R community. This post is some kind of survey. Personally, I use Emacs with ESS, It permits to : - open more than one R session - split the emacs editor as many part as you want. - use a lot of keybindings. ... I also tried Rkwards, Scilab (windows), JGR etc... but they are not

I love the new tiff(), jpeg(), and png() in R 2.7.0 but found an issue that I didn't see reported. When specifying 'units = "in"' but forgetting to change the default height and width (so the figure is unintentionally going to be 480 inches by 480 inches) I run into problems. Here's the reproducible example: tiff("a.tiff", units = "in", res = 1200,

Hi, I am looking for a R package which is capable to process and analysis pictures of tissues (stained) in an automatic way. I had a look on biops and EBImage (Bioconductor) but they are not automatic... Did you already use/know a such package ? Thanks, - Martial _________________________________________________________________ Tchattez en direct en en vidéo avec vos amis !

When I tried this, I'm having this error. Can somebody help me on this. Are there any alternatives or workaround for this? I'm having hard time to convince our admin to install X11 library and headers since they are not included on the default OS installation. Thanks in advance :) > jpeg("test.jpg") Error in jpeg("test.jpg") : X11 is not available >

I am having trouble showing the Greek symbol "beta" correctly in the y-axis label of bitmap plots. Specifically, on my system the top of the "beta" symbol is cut off using the following example: file.jpg <- paste(tempfile(), ".jpg", sep = "") jpeg(file.jpg, h = 3, w = 3, units = "in", res = 300, type = "Xlib") boxplot(rnorm(10),

Hi, I'm installing R 2.10.1 under Linux but I don't know why my installation does not support png/cairo/jpeg: > capabilities() jpeg png tiff tcltk X11 aqua http/ftp sockets FALSE FALSE FALSE FALSE FALSE FALSE TRUE TRUE libxml fifo cledit iconv NLS profmem cairo TRUE TRUE TRUE TRUE TRUE FALSE

Dear All, I would like to use the 'split' function on the dataframe elements contained in a list L. For example : > (df <- data.frame(cbind(c(rep('A',2), rep('B',2)), rep(1:4)))) X1 X2 1 A 1 2 A 2 3 B 3 4 B 4 > (L<-split(df, df$X1)) $A X1 X2 1 A 1 2 A 2 $B X1 X2 3 B 3 4 B 4 Now, I would like to split EACH data frame, ie, according to

Hi, It seems that anti-aliasing in png(type = 'cairo') is not well supported for the point symbols without boarders, e.g. pch = 16. The Cairo package works well, though. You can compare png() with CairoPNG(): png(): http://i.imgur.com/8niB3jX.png CairoPNG(): http://i.imgur.com/FZBJOxm.png f = function(dev, ..., main = '') { dev(...) plot(c(1, 2, 1, 2), c(1, 1, 2, 2),

Dear r-developers, I currently face an issue while compiling R from source on a debian wheezy. When running the configure script (particularly with --enable-R-shlib --prefix=/packages/R/3.1.0/) I get a Makefile and the output ... Interfaces supported: X11 External libraries: readline Additional capabilities: PNG, JPEG, NLS Options enabled: shared R library, shared

Hi, I am looking for a R package to draw 3d plot. But not in a static way like scatterplot3d or stuff like that. I would like to make rotate the plot, to zoom/unzoom etc..., actually to render the graph 'dynamic'... (for the biologist and bioinformatician, a R package which permitts to reproduce what pdb viewer does). Does a Way exist to do something like that in R ? Thanks,

Hi all, I have been having problems generating png files on a Mac running OS X 10.6.8. Here's a simple example > png("foo.png", type = "cairo"); plot(1:10); dev.off(); null device 1 libpng warning: Application built with libpng-1.2.26 but running with 1.5.2 The resultant file is of size 0 Kb. Is this the proper place to report this issue? Or should

r-help?? When I want to use jpeg() in R-2.1.1 which is installed in linux platform to generate a jpeg file, the error occurs as following: > jpeg() Error in X11(paste("jpeg::", quality, ":", filename, sep = ""), width, : unable to start device JPEG In addition: Warning message: unable to open connection to X11 display '' > capabilities()

Hello, When launching R from a script, when queried it reports the following capabilities as false: jpeg, png, x11 and cledit. When R is run from a terminal session, all of these capabilities are reported true. R is running on FC4. As the purpose of this script is to output the png file to a browser, it is unable to complete because of this. Any ideas are appreciated. We have an identical

R version 2.5.1 (2007-06-27) I' running some simple R jobs via the Sun Grid Engine on our Linux cluster in preparation for some bigger ones. I checked R's capabilities on the cluster nodes (after failing to create a png file) and am getting the following warning message: [Run on a cluster node using qrsh:] > capabilities() jpeg png tcltk X11 http/ftp sockets

Hello, Do you know a R implemented normality test like the shapiro test but more suitable for large data set ? Thanks, _________________________________________________________________ Découvrez toutes les possibilités de communication avec vos proches [[alternative HTML version deleted]]

New years greetings. I have been setting up a function to generate multiple jpeg charts. When the calls are issued at the interactive console, the jpeg files are generated without an issue. When I try to issue the same calls from a function, some chart files are empty. It appears to only be related to trellis charts. Any help to troubleshoot this is appreciated. Regards, -mike R version

Getting this oops on one of our production servers pretty much hangs the server. Do we have a corrupted Journal? how would ewe rebuild it? Any idea how to recover from it? Assertion failure in journal_bmap() at journal.c:636: "ret != 0" invalid operand: 0000 CPU: 0 EIP: 0010:[journal_bmap+70/96] Not tainted EIP: 0010:[<c016b646>] Not tainted EFLAGS: 00010282

Dear all, I noticed that the r-base package for Ubuntu 8.04.1 do not have the tcltk support compiled in. Would it be possible to correct this? > echo "capabilities()" | R --no-save | tail -6 [Previously saved workspace restored] > capabilities() jpeg png tcltk X11 aqua http/ftp sockets libxml TRUE TRUE FALSE TRUE FALSE TRUE

Hi, When I want to output a png file, I have the following error message : Error dans X11(paste("jpeg::", quality, ":", filename, sep = ""), width, : inpossible de d?marrer le p?riph?rique JPEG De plus : Warning message: impossible d'ouvrir le fichier JPEG 'Test.jpeg' or in english Error in X11(paste("jpeg::", quality, ":",