similar to: Updating Packages with Personal Library

Updating my 1.8.0 R installation (>update.packages() ) I obtain the following (SORRY FOR THE LENGTH OF THE LOG BUT IT HELPS!!!): ................ downloaded 135Kb KernSmooth : Version 2.22-11 in /usr/lib/R/library Version 2.22-12 on CRAN Update (y/N)? y mgcv : Version 0.9-3.1 in /usr/lib/R/library Version 0.9-6 on CRAN Update (y/N)? y trying URL

Dear all, I'm trying to run a script that requires KernSmooth in BATCH mode but I get an error while loading rgl library that is needed by KernSmooth. Actually I have to run several batch files through a queue of a cluster, so I wouldn't need graphics at all. I installed the latest releases of R (2.6.1) and rgl on my CentOS 4.2 Linux (clone of Red Hat EL) endowed with Rocks 4.2.1 suite

Hi, I recently updated to R 3.0.1. I'm running linux ubuntu 12.04. I realized that I have to update all the installed packages so I run > update.packages(checkBuilt=TRUE) as described here http://www.r-bloggers.com/r-3-0-0-is-released-whats-new-and-how-to-upgrade/ . The first thing it did was telling me that it will not update several packages. When it was finished I used the warnings

Hi Everyone, I have a few fairly basic questions about upgrading and installing R packages. First off, I am using Ubuntu Hardy Heron and have R 2.7.1 installed and working perfectly. I usually access R via Emacs ESS interface which I am still trying to get the hang of. My questions and issues are as follows: Question 1: I started R and wanted to upgrade the installed R packages. So, I issue the

In reference to the thread http://tolstoy.newcastle.edu.au/R/devel/04/10/0859.html I have the same problem updating packages with newly-installed version of released version of R 2.0.1. Previous posts refer to a bug in windows. I wonder if there is a work-around? This probably should go to R-help but it follows on from the post in R-devel. Apologies in advance. OS: Windows XP Professional,

Folks: A minor (R 2.2.0) Windows package install annoyance, but I can't figure out how to fix it. If someone could tell me how or point me to the appropriate docs, I would appreciate it. I set my CRAN mirror in my Rprofile.site file. After startup, I get: > getOption('repos') CRAN "http:/cran.cnr.berkeley.edu/" > However, when I then go

=20 =20 I use the FEAR package available from=20 =20 http://www.clemson.edu/economics/faculty/wilson/ =20 which works perfectly in Rv2.2.0; after installing from a local zip and loading I find: =20 USING R version 2.2.0 =20 > local({pkg <- select.list(sort(.packages(all.available =3D TRUE))) + if(nchar(pkg)) library(pkg, character.only=3DTRUE)}) Loading required package:

Hi Here's a warning for you. If you start R today and it can't find any packages in your home directory that it did find yesterday, don't faint. You'll see something like this: > library(data.table) Error in library(data.table) : there is no package called 'data.table' and your user home folder R packages will no longer appear in path: > .libPaths() [1]

Hello, I'm using R 1.40 on MacOS X X.1.2 (installed via the fink package manager). To upgrade my installed packages, I tried to use update.packages() today. All went well for most packages, with the exception of KernSmooth and cluster. In both cases, libraries were not found although I think they are present. Here's what happened: ---------------------------------- >

Hi, I run windows vista ultimate in my laptop and run R 2.5 I am trying to update the packages but it comes up with an error message ""Warning in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : 'lib' is not writable Error in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, :

I am moving from windoze on a Dell laptop to Debian but I seem to have hit a snag for R. I managed to find the information to point an /etc/apt/sources.list entry at my local CRAN repository and have installed R 2.13.1 for squeeze from the Bristol UK repository. I installed a number of the additional R packages using synaptic which reported no errors but when I run my first

Hello, I am running R 2.1.0 on Windows 2000. When I attempt to install or update packages, regardless of whether I use the menu or command line, I get the following error. > utils:::chooseCRANmirror() > utils:::menuInstallPkgs() Warning message: unable to connect to 'cran.cnr.Berkeley.edu' on port 80. Warning: unable to access index for repository

Hi, I am trying to load the library(ks), but I am getting the following error: Loading required package: KernSmooth KernSmooth 2.22 installed Copyright M. P. Wand 1997 Loading required package: mvtnorm Loading required package: rgl Loading required package: misc3d Error in lazyLoadDBfetch(key, datafile, compressed, envhook) : ReadItem: unknown type 241 In addition: Warning messages: 1:

The specific message is: "Warning: package 'spatial' in library '/usr/lib/R/library' will not be updated" and the number of libraries about which that's the complaint is now increasingly almost daily so clearly something is wrong. I'm working on a laptop on which I do the recommended Ubuntu updates daily. I done a standard installation of R 2.15.1 using

Brian Yandell <byandell@wisc.edu> writes: > Folks, > I am working on a Windows system which is part of the UW-Madison > statistics LAN. R is maintained on a file system to which I cannot write. > I tried installing a package and got the following interplay: Set the lib argument to install.packages to a directory in which you do have write permissions. From ?install.packages

I am running R 1.2.1 under Mandrake Linux 7.2 (installed from RPM) and I installed a few packages using install.packages() . Now, I am trying to upgrade these packages using update.packages() but I believe I am running into some kind of error. See below. Any tips will be greatly welcome. Thanks in advance. Francisco PS: update.packages() only tries to update wle from version 0.3 to 0.4, gives

sir, i am trying to install r package Bayesian quantile regression but i am facing with following problem which says forPlease select a CRAN mirror for use in this session --- Warning: unable to access index for repository http://cran.cnr.Berkeley.edu/bin/windows/contrib/2.6 Warning: unable to access index for repository http://www.stats.ox.ac.uk/pub/RWin/bin/windows/contrib/2.6 Error in

Hi, I am running Debian Sid. I am having trouble with the R packages. Executing 'help()' or 'demo()' launches 'most' with no text. 'help.start()' works properly. When I try to install a package, I get the following problem: ********************************************************************* > install.packages("ctv") Installing package(s) into

I don't use MySQL but I have seen messages like this before. They often have replies which indicate that you need to follow the instructions more closely. I suggest you search the list for these previous posts as I'm sure there is help there, somewhere! Tom > -----Original Message----- > From: Adriano von Sydow [mailto:pdasilva at xtra.co.nz] > Sent: Thursday, 10 March 2005 5:13

Full_Name: Thomas R Famula Version: 2.2.1 OS: Linux - fedora core 4 Submission from: (NULL) (169.237.28.28) Sorry to bother - I hope this is a simple fix. Here is the set of error messages I recieved in trying to install the "gmodels" package. I typed in "install.packages(c("gmodels"))" as the root and recieved the following series of replies: