similar to: colouring a tree

Hi, I have a problem with making PCA plots that are readable. I would like to set different sympols instead of the numbers of my samples or their names, that I get plotted (xlabs). How is this possible? With points, i don´t seem to get the right data plotted onto the PCA plot, as I do not quite understand from where it is taken. I dont know how to plot the correct columns of the prcomp

Hi, I haven't tried the code yet. Is there a way to parse this data using R and create bar plots so that each program's 'RAM used' figures are grouped together. So 'uuidd' bars will be together. The data will have about 50 sets. So if there are 100 processes each will have about 50 bars. What is the recommended way to graph these big barplots ? I am looking

Dear all, I am facing a strange problem with text files formats. I am currently using a C++ code named voro++ (http://math.lbl.gov/voro++/). This code accepts text files with four columns: <id> <x> <y> <z> where id is an identification number and x,y,z are the coordinates of a point in a 3D space. The input file, name it myfile_cpp.txt, is generated by another C++ code

>>>>> "Llu?s" == <Lluis.Hurtado at uv.es> writes: Llu?s> Dear all, Llu?s> I am facing a strange problem with text files formats. Llu?s> I am currently using a C++ code named voro++ (http://math.lbl.gov/voro++/). This code accepts text files with four columns: Llu?s> <id> <x> <y> <z> Llu?s> where id is

Hi, I am trying to colour a text_area input field, including the scrollbar (2-dimensional field). I was able to change the colour of a button associated with a ''submit_tag'' by adding a :class and defining properties in my CSS file. Is something similar required? Thanks, Lee. ___________________________________________________________ All new Yahoo! Mail "The

Hi! How can I fill with colors a portion of a graph (e.g.: I want fill in red the area within two confidence intervals)? Thank you very much Cristian ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Cristian Pattaro ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Unit of Epidemiology & Medical Statistics University of Verona Tel +39 045 8027668 fax +39 045 505357 cristian at biometria.univr.it

Hello, Below a modified function for displaying a correlation matrix by Vincent Zoonekynd posted in his excellent tutorial. Compared to the matrix and the legend, the colouring of the polygons is wrong. The error is in the sequence: col=col[N*(mat[i,j]+1)/2]. I cannot seem to devise a sequence which will make the colouring consistent with that in the legend. Can you help? The number of different

Hi, I am attempting to create a polar chart (using plotrix polar.plt) and I need to colour a segment of the grid to indicate an area of interest, say from 90-120 degrees, for arguments sake. Is this possible? I can colour the whole grid by passing the grid.bg parameter through to radial.plot but I cannot find a way to colour a segment. thanks, Darren -- View this message in context:

Hi - I'm trying to plot a map from a shapefile and then colour different areas of it depending on different attributes of those areas. A couple of years ago I used some code to do this that would plot a map in R from a shapefile (states within a country). It then uploaded a .txt file which had the same number of rows as the shapefile and one column populated with numbers from 1 to 8 which

Hi everybody, as I am dealing with complex confusion matrices, I wonder whether there might be a way to colour text/tabular data in R. I.e. imagine highlighting the true positive values or certain classes in a table. I know how to colour text in graphical output as well as how to sweave or odfWeave coloured tables. But is there a way to do it directly in an interactive R session? Of course I

I decided to do a direct comparison of transpose and sweep. library(microbenchmark) NN <- matrix(c(1, 2, 3, 4, 5, 6), nrow = 2, byrow = TRUE) # Example matrix lambda <- c(2, 3, 4) # Example vector colNN <- t(NN) microbenchmark( sweep = sweep(NN, 2, lambda, "/"), transpose = t(t(NN)/lambda), colNN = colNN/lambda ) Unit: nanoseconds expr min lq

Hi, I have reconstructed ancestral character states on a phylogeny using MuSSE in the diversitree package and plotted the character state probabilities as pie charts on the nodes. I would, however, like to colour the character states of my extant species, i.e. the tip labels, the same colours as my pie charts, such that all species in state 1 are e.g. blue, species in state 2 red and species in

Dear all, I wanted to create the mean using a algebra matrix. so I tried this one: > meanAnimals <- new3%*%factorial (Calculates the matrix multiplication of the new3 * factorial). But I get the following error message: Error in new3 %*% factorial : non-conformable arguments These are my matrices: > new3 [,1] [,2] [1,] 1.350 8.1 [2,] 465.000 423.0

I have a data set with 6 variables and 251 cases. The people who supplied me with this data set believe that it falls naturally into three groups, and have given me a rule for determining group number from these 6 variables. If I do scaled.stuff <- scale(stuff, TRUE, c(...the design ranges...)) stuff.dist <- dist(scaled.stuff) stuff.hc <- hclust(stuff.dist)

On 01/13/11 04:29 AM, Krzysztof ?elechowski wrote: > Dnia ?roda, 12 stycznia 2011 o 09:26:30 Alan Coopersmith napisa?(a): > >> On 01/11/11 11:19 AM, Krzysztof ?elechowski wrote: >>> The manual page for *xedit* does not say how to switch syntax colouring off and the display for *HTML* is awful. The font used for /code/ is smaller than the font used for /text/ , to the point

I have weekly time series data with year, month, day, and price variables. The input data set for the weekly series takes the following form: Year month day price 1990 8 20 119.1 1990 8 27 124.5 1990 9 3 124.2 1990 9 10 125.2 1990 9 17 126.6 1990 9 24 127.2 1990 10 1 132.1 1990 10 8 133.3 1990 10 15 133.9 1990 10 22 134.5 1990 10 29 133.9 .. ... ... ... ... ... .... .... 2008 3 3 313.7 2008

R-help, I'm getting some unexpected behavior with subsetting a data frame (aircraft flight data) that I can't sort out. Here is a simplified version of my data frame and problem: > flight FlightID TailNo FlightDate HobbsTime FlightCost Date year 1 4497 6009K <NA> 2.2 330.0 <NA> NA 2 4498 6009K <NA>

Hi everyone. I'm trying to do a loess with missing value on independant variable. doc = c(2.27904, 2.59536, 7.44696, NA, 6.24264, 4.58400, 5.79192, 5.39502, 7.41216, 4.09440, 4.22868, 4.24620, 5.43804, 1.95528); distance = c(26.5,56.5, 90.3, 123.0, 147.5, 176.0, 215.7, 229.3, 252.0, 325.3, 362.0, 419.3, 454.6, 470.0); myloess = loess(doc ~ distance, na.action = na.omit); plot(distance,

Hi! I have iMac24" computer powered by Back-UPS CS650IE. (USB) I Installing NUT using Fink packages from source. Configuring NUT : 1. /sw/etc/nut/ups.conf [CS_650] driver = newhidups port = /dev/ttyS1 2. /sw/etc/nut/upsd.conf ACL all 0.0.0.0/0 ACL localhost 127.0.0.1/32 ACCEPT localhost REJECT all 3. /sw/etc/nut/upsd.users [nobody] password = allowfrom = localhost

I'm trying to export a large data frame to a text file for permanent storage. The only thing I could find was the treeglia Package but that didn't work. Any suggestions? Thanks! Christina D Smith PhD Student, GRA Statistics Department Kansas State University