similar to: multiple xYplots

Dear All, I'm having trouble ploting multiple xYplots (Hmisc) within the same pg although I've done it before w/ xyplots. I've produced 4 similar plots e.g. rna.h<-xYplot(Cbind(RNA,Lo,Up)~HO|factor(MO,labels=c("April", "May","June")),data=diel.data,method="bars",type="b", keys="lines",pch=16,col=1,cap=.04,

*Thanks* all those who took the time to help me (even if the "question" was not related to - the use of - R). Now I think I can soundly make my point w/ the referee (can I use your replies? If so I intend to properly cite its use?!?). Regards, Eduardo Esteves ps - Sorry for not explaining the "biological details" of my posting: RNA/DNA is the ratio of RNA content to

Dear All, I'me having (much) trouble understanding why it happened and answering a referee's comment to part of a submitted manuscript. I've tried to google for help but... I'm really confident that although this is a R-Help list someone can help me! I used R to do an ANCOVA w/ RNA/DNA as the dep var, sl as the indep var and gut (a factor w/ levels: prey and empty) as the

Hi , I know this question has been asked twice in the past but to my knowldege, it still hasn't been solved. I am doing a zero inflated binomial model using the VGAM package, I need to obtain p values for my Tvalues in the vglm output. code is as follows > mod2=vglm(dmat~Season+Diel+Tidal.phase+Tidal.cycle,zibinomial, data=mp1) > summary(mod2) Call: vglm(formula = dmat ~ Season +

Dear R-users, I was wondering if somebody could shed some light on the relationships existing between the resolution of a png device, the axis.text$cex trellis setting, and the paddings of the actual graph. In the following code, I create a custom trellis theme that set (among other thing) axis.text$cex to 1 instead of the default 0.8. Then a lattice graph is created and exported to three png

Full_Name: Craig A. McKinstry Version: 1.0.0 OS: WinNT4.0 and Win98 Submission from: (NULL) (192.101.100.130) When creating a multi-panel graphic, the command par(mfg=c(i,j,r,c)) is supposed to allow the user free movement between graphics panels to develop each panel separately. This works for the first invocation of par(mfg=c()) and for the first panel panel specified, but not for subsequent

I am finding on all my CentOS 5.8 systems (all fully updated but a variety of package mixes) that the display or convert commands from ImageMagick are unable to handle eps files. I get error output as follows, curious if anyone else sees this $ convert rna.eps rna.epi convert rna.eps rna.epi Error: /undefinedfilename in (72x72) Operand stack: Execution stack: %interp_exit .runexec2

Full_Name: Thomas Richardson Version: R 2.9.0 GUI 1.28 Tiger build 32-bit (5395) OS: 10.4.11 Submission from: (NULL) (216.254.15.72) I have encountered a problem with points in scatterplots disappearing in a quartz window when it is re-sized (to make it larger). I am constructing an 8x12 matrix of scatterplots each containing approx 600 points. In order to get them in the window I remove the

It might have a noticeable effect on clients. I encountered (probably triggered by this in some way?) that I was unable to het the 'read' bit set in macOS Mail.app. Maybe (as I am doing HA with round robin) the Mail.app client got to one dovecot repository on one tcp connection and then on the other. Is there a reason why syncing tis move from new to cur is a bad idea? Gerben Wierda

On January 6, 2023 3:56:39 AM GMT+02:00, Gerben Wierda <gerben.wierda at rna.nl> wrote: >One step further in my quest to create a replacement mail server. > >I now have my old mail server (2.3.19.1, macOS + MacPorts) and my new (2.3.20, Alpine Linux, Docker, apk package). When I turn on replication it works, but, after a while I see: > >Jan 06 00:50:31 replicator: Panic: data

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Hi All, Can anyone please help me with getting a "single title" and "legend" for both the plots in the following R code. I'll eventually be using .wmf file. # R code: library(lattice) p1 <- xyplot(decrease ~ treatment, OrchardSprays, groups = rowpos, type = "a", main="Same title / legend", auto.key = list(space = "right",

Hi all, I am difficulty with simple layout of plots in the lattice package I have created a series of levelplots and would like to plot them to a single device, but need to reduce the margin areas. This is easily accomplished with par(oma) and par(mar) in the base graphics package but I am having problems finding the equivalent features in the lattice package. Ideally, I would like to reduce

Hi, I have a series of lattice plots which I am arranging in a 2x2 grid via print: print(p.preds, split=c(1,1, 2,2), more=TRUE) print(p.comp, split=c(2,1,2,2), more=TRUE) print(p.bw, split=c(1,2,2,2), more=FALSE) What I'd like to have is a letter (A, B, ...) in the top corner of each plot. While panel.text lets me add text anywhere within a plot, I can't seem to workout how I could put

Hi all, new to this forum I'm try to using R to draw a heatmap of my RNA-seq data before doing that I did a log2 transformation of my data and produce a lot -inf in the matrix when I try to use the heatmap function, it seems can not deal with the -inf so I was wondering how to deal with these gene with 0rpkm(they are not 0 in all samples, so I want to keep them in the heatmap) thanks -- View

Hi all, I've read the emails of Dan, Deepayan and Sundar about adding error bars to the lattice plots ( https://stat.ethz.ch/pipermail/r-help/2006-October/114883.html), but I still have the problem when I want to adding error bars to barchart. I tried both the solution of Deepayan and Sundar but without luck. Here is my code (I changed prepanel.ci and panel.ci a little to plot bars

I can confirm this in a slightly different setting, but still using two-way sync between two dovecots. On e is 2.3.19.1 running on macOS Monterey, the other is 2.3.20 running in an alpine container on Ubuntu. Gerben Wierda (LinkedIn <https://www.linkedin.com/in/gerbenwierda>) R&A IT Strategy <https://ea.rna.nl/> (main site) Book: Chess and the Art of Enterprise?Architecture

How problematic is it to have default_vsz_limit = 0 in dovecot.conf? macOS+MacPorts had this as a requirement even. Gerben > On 6 Jan 2023, at 16:49, Paul Kudla <paul at scom.ca> wrote: > > > i ran into this as well > > here is the full config for mine with replication > > # cat dovecot.conf > # 2.3.14 (cee3cbc0d): /usr/local/etc/dovecot/dovecot.conf > #

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Hello, this is my first posting to the Samba mailing list! At our company, we are running Samba version 2.0.4a on an SGI Origin 2000. Our client PCs are running Windows NT 4.0 and Windows 2000. We are seeing a problem in which a user can create a document and save it in one of our Samba shared directories, however if he/she tries to make any changes and save them, the file's Unix permissions