similar to: Scatter plot transparency

Hi, Here's the data we have: > rs[1:5,] probe_id f1 f2 f3 f4 M A f 1 A_68_P20002076 2 58 0 0 1.51778114 6.344453 59 2 A_68_P20002775 22 8 15 0 0.43419304 5.488819 59 3 A_68_P20005791 43 3 0 0 0.05698666 9.830594 59 4 A_68_P20005805 11 34 0 0 1.71076835 6.624038 59 5 A_68_P20006729 16 44 0 0 0.85498261 6.044229 59 I want rs$f be the max of f1, f2, f3,

I'm trying to use combine c('a','b','c','a','c') into 'a, b, c', the order does not matter. paste(c('a','b','c','a','c'), collapse=', ') yields 'a, b, c, a, c'. Any idea? -- Regards, Anh Tran [[alternative HTML version deleted]]

Hi all, What parameter should I feed to the hist function to draw a line, not bar graph for a histogram? Smoothed line would be great too. I've looked at curve() for normal distribution but it's not what I need. I need some curve on top of the histogram (fit to the actual data). Just as a way to illustrate, rather than bargraph. Thanks -- Regards, Anh Tran UCLA NeuroOncology Lab

Hi, Is there away to print a short table out along side with a plot? I'm thinking about doing a par(mfrow = c(1,2)) Then, the plot is on one side, summary result on the other. Is there any quick way to print out a data.frame in table format? Thanks -- Regards, Anh Tran [[alternative HTML version deleted]]

Hi, Let say I have this matrix: > mat<-matrix(cbind(rnorm(20),rnorm(20)), ncol = 2) And I want to rescale values of column [,1] and [,2] using values from row 1 to 5, such that the values of row 1:5 should be rescale to the same amplitude (kinda like take the z-score of population from row 1:5). column 1 and 2 are two different samples need to be compared. I hope I made myself clear

Am 15.06.2015 um 18:53 schrieb Ralph B?hme: > On Mon, Jun 15, 2015 at 12:57:52PM +0200, Sascha Kasch wrote: >> dear list, >> >> thanks for the great fruit speed-improvements. but... >> >> server config: >> debian 8 jessie >> sernet samba 4.2.2 packages >> >> here we see a problem that might not only be fruits problem but >> results in

Hi, I need some opinion.  I would like to use graph that I generate from R code and save it into word document.  Which format is better? pdf, jpeg or tiff? Thank you. [[alternative HTML version deleted]]

Hi, What's one way to convert an integer to a string with preceding 0's? such that '13' becomes '00000000013' to be put into a string I've tried formatC, but they removes all the zeros and replace it with blanks Thanks -- Regards, Anh Tran [[alternative HTML version deleted]]

Also sent to Codeweavers - [what is this list's insights?] I have a 32 GB, dual quad-core desktop machine and was considering 32-bit Windows XP w/SP2, but discovered it only supports up to 4 GB RAM, so that idea is shot. Next in line is 64-bit CentOS 5. The major need for Windows would be very active use of Adobe Acrobat 8, Photoshop CS3, and Illustrator CS3. There may also be the need

Hi, I have been working with R for the past couple of years; analyzing data and producing some graphics. I was just wondering if people use graphics from R straight into articles or are they always edited in some way; fonts, headers, axis, color etc? Using photoshop or some other programs? I would like to think it is possible, better and more profession to do it all in R. I tried google and

dear list, thanks for the great fruit speed-improvements. but... server config: debian 8 jessie sernet samba 4.2.2 packages here we see a problem that might not only be fruits problem but results in macosx 10.9.5 crashing with a kernel panic when saving from adobe illustrator cc or cc 2014: (does not happen when saving from photoshop cc or cc2014) Kernel Extensions in backtrace:

Hi There, I have created the following function format<- function(){ repeat { form<-readline(paste("\nIn what format do you want to save these plots?\nChoose from: wmf, emf, png, jpg, jpeg, bmp, tif, tiff, ps, eps, or pdf.\nNote: eps is the suggested format for publication quality plots.\nPlot format --> ")); cat("\nI'm sorry, I don't know what that format

Hi gang, I always open more than 1 R console in Windows. I can't figure out a way to do this with OS X yet. I need that to utilize the duo core on my desktop. How would I do that? -- Regards, Anh Tran [[alternative HTML version deleted]]

Hi all, I recently found out that R does not utilize fully the Duo Core capability when you only run one instance of R. I did some number crunching today and it seems that if I only open 1 R console, it uses 50% of my CPU (either 50-50 or 100-0 on 2 cores). Then, I open the second instance and divide the work into two parts, and run them parallelly, they seems to utilize 100% of my CPU. So, my

Hi all,I know this topic has came up multiple times, but I've never fully understand the apply() function. Anyway, I'm here asking for your help again to convert this loop to apply(). I have 2 data frames with the following information: a1 is the fragment that is need to be covered, a2 is the probes that cover the specific fragment. I need to count the number of probes cover every given

Hello, everyone! The code below allows me to produce the graph I want (I know - the colors are strange, but it's just for the sake of an example). After you run the plot<- part and then do print(plot) - that's what I want. However, when I run the bits of code below (with graphics devices) - what they print is different from the original plot. In .png, .emf, and .tiff - my dots change

Dear all, When I start Adobe Illustrator 9.0 and ImageReady.exe from Photoshop, both application suffer from the same problem. The toolbars seems get stuck with the mouse once you try to move the toolbar windows. I saw people having the same problem as I did. Is this a known problem which can be fix? Thanks. regards, David

Hello, I am new on this list. I have installed Wine successfully on my Mandrake but i think i couldnot configuire is smoothly. Whatever i can run simple programs like WinZip and mIRC with it but complex programs like Macromedia Flash and Photoshop CS is not running. It says that required files were not found in the Adobe Hpotoshop CS folder. Re-install photoshop to restore these files. Flash also

Firstly, I aint no computer whizzkid, I'm a designer. Sick to the back teeth of Windows so I'm wishing to convert to Linux. I've installed WINE on Mandriva, I can't install the applications I wish to. When I try to installed Adobe Photoshop 8.0 it says Error -6600 Could somebody please explain a step by step how I can just install the following applications.... Adobe Photoshop

Hey, I am still working on my heat map (for those who are read my previous post about row.names)… Now, I would like to save my heat map.2 in .png or .tiff in order being able to work on the picture in photoshop, but it doesn't work. I'am using (as I have found on some forum) > png("heatmap.2.png) # and it just doesn't work. when I try doing it with::