similar to: Appending diagnostic information to all lines sent to stdout and stderr

Hi I came across this strange bug the other day, I'm not sure how to solve it and I wonder if anyone can even replicate it. Using OS Ubuntu 7.10 Step 1) Make an R package using the package.skeleton() command with only these two functions: error <- function(){ cmd <- paste(" -a ",1," -a ",1," -a ",1, " -a ",1," -a

Dear all I'm building logistic regression models using glm() and then validating their predictive ability on a test set using predict() to get the probabilities. I understand how to attain the deviance of the model fitted to the training set. But is there a way to get the deviance within the test set? Cheers Tom -- Thomas Allen Department of Biochemistry University of Otago 710 Cumberland

Hi I'm using Ubuntu 7.10 with 2GB RAM and a 2GB partition of the HDD set aside as a swap drive. I'm trying to write programs which are quite RAM intensive and as such I sometimes run out of RAM and the process is killed. At the moment I'm storing much data on disk, reading it in to a datastructure, processing it, then writing it out again. Finally the datastructure is removed with

A package I have written makes considerable use of external C code. There appear to be no problems building a Windows binary with the GNU C compiler, but now I would like to make the package available for other platforms. A stringent check of the code with the gcc options '-Wall -pedantic' flags many nested functions and variable-length arrays that are not allowed in ISO C. Is it

Dear R users I would like to simulate underdispersed Poisson and binomial distributions somehow. I know you can do this for overdispersed counterparts - using rnbinom() for Poisson and rbetabinom() for binomial. Could anyone share functions to do this? Or please share some tips for modifying existing functions to achieve this. Thank you very much for your help and time Shinichi

Hi, I am trying to connect points on a graph that originate from *different columns of data*. For each sample I have minimum and maximum data points and I would like to draw a line connecting these in order to visualize the spread, as well as where each sample is in relation to the x-axis. So far I can generate the points, but the only lines I have been able to make join all the minimum values

I have just used the RAqua.pkg to install R, and it doesn't work! I have Mac OS X 10.3, and the old version of R works OK, but the .pkg thing installed, and then when I double-click on the "StartR" application nothing happens. Nothing at all, no little icon bobbing up and down in the dock, just nothing. What have I done wrong? I didn't have to install the other packages

Hi, Is there any equivalent of type="n" when constructing barplots which will still construct the axes (plot=F, as it says doesn' plot anything at all). Alternatively I tried setting col="white" and border="white" but the border command does not seem to be operational. True?? Any other ideas? What I'm actually trying to do is construct vertical abline()'s

Why is 19 March, 1947 a little longer than one day? x <- as.POSIXct("1947-04-16") julian(x, origin = as.POSIXct("1947-03-20")) Time difference of 27 days julian(x, origin = as.POSIXct("1947-03-19")) Time difference of 28.04167 days > julian(x, origin = as.POSIXct("1947-03-18")) Time difference of 29.04167 days I am running R-1.7.1 compiled on

Dear All I recently proposed a simple modification to Wedderburn's 1974 estimate of overdispersion for count and binomial data, which is used in glm for the quasipoisson and quasibinomial families (see the reference below). Although my motivation for the modification arose from considering sparse data, it will be almost identical to Wedderburn's estimate when the data are not sparse.

Hi there folks I have R 1.3.0 running on Red Hat Linux 7.1 with GhostView 3.5.8. When I produce a file like: > bitmap("foo.pdf", type="pdfwrite") > plot(foo) > dev.off() and then try to read it with gv, I get an unrecoverable error and nothing displayed. Any help as to whether this ***should*** work would be appreciated. cheers, John -- John Williams

Howdy, I?d like to achieve something that i don?t know if it?s possible. I have account info at domain.tld and when an email is received, I want to forward it to several accounts, always in this order: ? Email1 at domain.tlf ? Email2 at domain.tld ? Email3 at domain.tld And when it reached email3 at domain.tld it starts again with email1 at domain.tld Would something like

> I had some trouble compiling the new R version on my Alpha: > > make[2]: Entering directory `/usr2/local/R/src/graphics' > cc -ieee_with_inexact -O -Olimit 2000 -I/usr/local/include -I../include -c > gdevice.c > cc -ieee_with_inexact -O -Olimit 2000 -I/usr/local/include -I../include -c > graphics.c > cc: Error: graphics.c, line 808: An unexpected newline

Hello all, I'm trying to use the package qvalue. Upon trying to install it I'm running into trouble. I re-downloaded and installed the most recent CRAN distribution of R which announced itself to have tcltk included. Now when I try to load qvalue I'm getting errors that seem to indicate that I need tcltk2. I tried going to get that package and loading it but both qvalue and tcltk seem

Hi there I have a post I would like to put on the "95% confidence intercal with glm" thread. Thank-you so much! I am wondering first of all if anyone knows how to calculate confidence intervals for a GLMM? I use the lme4 library. Also, I am wondering how to predict a model mean and confidence intervals for a particular independent variable? For example in the following example:

Hi, I am new to Dovecot and I am trying to link an email account folder to another Maildir(its a backup of the older email). I want the email account to be able to access the older emails. I am assuming this is done by creating a symlink? Currently reading instructions on this page:- https://wiki.dovecot.org/SharedMailboxes/Symlinks At the moment I have the folder:-

Dear List, I want to run a rsync-ing script in cron, generating a very verbose -vv rsync log in a log file. The log file should combine both stderr and stdin, which is easy: backup.sh >>/var/log/backup.log 2>&1 However, I would like to propagate only stderr to cron - in case there has been an error, cron will mail me the assembled stderr output. I tried the following: $

"Alexander Georgiev" <alexander.georgiev at gmail.com> wrote: > I want to run a rsync-ing script in cron, generating a very verbose > -vv rsync log in a log file. The log file should combine both stderr > and stdin, which is easy: > > backup.sh >>/var/log/backup.log 2>&1 > > However, I would like to propagate only stderr to cron - in case

Hi I am getting messages like total: matches=0 tag_hits=0 false_alarms=0 data=0 or total: matches=29 tag_hits=59 false_alarms=0 data=1663794 in STDERR when I use rsync with "-vv". Is this a known bug? Here is the full rsync command: rsync -e ssh -abvv --delete --exclude lost+found/ --exclude core --exclude *.o --exclude .netscape/cache --max-delete=250 --backup-dir=/some/path

I am stuck with this issue for some time and I need your help/thoughts. I am using Ruby 1.8.3 and Rails 0.14.2, running on Linux (Fedora) and lighttpd. When ever there is an exception while parsing RSS feeds or Webservice call,error messages and logs are shown on the browser. This happens only when there is an exception thrown and on Linux. lighttpd has write access to the log files. Am I