similar to: Sweave: looping over mixed R/LaTeX code

Dear guRus, I am trying to replace "~" by "$\sim$" for TeX. However, I can't get the backslash to work. I would like to turn "DV~IV" into "DV$\sim$IV". sub("~","$\sim$","DV~IV") => "DV$sim$IV" sub("~","$\\sim$","DV~IV") => "DV$sim$IV"

Dear list subscriber, I am quite puzzled by the behaviour of processing Sweave files within an R session, i.e. Sweave("foo.Rnw") versus R CMD Sweave foo.Rnw In the former the environmental variable 'SWEAVE_STYLEPATH_DEFAULT = TRUE' is obeyed (this is set in etc/Renviron.site as well as under the users home directory in .Renviron). That is the hard-coded path to Sweave.sty is

Dear developers, I have come across a (somewhat strange) change in the encoding of Sweave output from R-2.9.2pat to R-2.10.0beta (apparently specific to Rgui) on Windows installations. Of course, the NEWS file contains quite a few changes concerning encoding, but I was not able to locate an entry which explains the observed behaviour. I am not very familiar with encodings/locales/codepages,

Dear list subscriber, suppose, I do have a minimal Sweave file 'test.Rnw': \documentclass{article} \begin{document} <<printx>>= x @ \end{document} Within R, I define the following function: f <- function(x){ Sweave("test.Rnw") } The call: f(x = 1:10) results in the following error message: > f(x = 1:10) Writing to file test.tex Processing code chunks

Hello Folks, When I run the document below through sweave, rgui.exe/rsession.exe leaves a file handle open to the sweave-001.pdf graphic (as verified by process explorer). Pdflatex.exe then crashes (with a Permission Denied error) because the graphic file is locked. This only seems to happen when there is an error in the sweave document. When there are no errors, no file handles are left open.

List, I would like to set a variable to hold, say, the size of my plots in a Sweave document. i.e. something like the following in my '.Rnw' file: ============================================================================== smallPlotSize = 4 <<fig1, echo=false, results=hide, height=smallPlotSize, width=smallPlotSize, fig=true>>= dat <- read.table("

Dear all, When running function 'testQAReport()', which uses function 'buildVignettes()' to create a pdf-file I get the following error: > source("testQAReport.R") > testQAReport() Error in .get_package_metadata(pkgdir) : Files 'DESCRIPTION' and 'DESCRIPTION.in' are missing. Since I did not get this error in earlier versions of R, could you

Hi, I was wondering if it's possible to have fonts in plots to be autoscaled to the same font size used by LaTeX in a surrounding Sweave document. Here's a short example in which the fonts of the first plot are barely readable: --8<------------------------schnipp------------------------->8--- \documentclass{article} \usepackage{graphicx} \newcommand{\mytext}{Some normal sized

Hi, I need to produce a standard report for several variables in Sweave and thus would need the possibility to define a TeX-command which includes R-code like \newcommand{\meansd}[1]{The mean is \Sexpr{mean(#1)} and the standard deviation is \Sexpr{sd(#1)} . } and then just write \meansd{age} in the latex code to get the whole sentence. The above does not work, since

Hello, I'm still trying to make the life of my colleagues easier. Nice, isn't it ? At the moment, I'm looking for a way to generate multiple "single report". In fact I have a .rnw file which send a query to a MySQL database (rs<-dbSendQuery(con, statement="select * from treatdata where name='Device1'") But of course my colleagues have many devices and

Hello! I was just wondering if Sweave can work with \input or \include LaTeX commands. So, is it aware of such a possible hierarchy in documents. I would test that, but I don't have such a report available at the moment. I thought of that when I was writting shell script for Sweave from command line and I have solved that part there. -- Lep pozdrav / With regards, Gregor GORJANC

Now that R 3.0.0+ supports non-Sweave vignettes, R-exts \S 1.4.2 seems to imply that it is possible to include both Sweave and knitr vignettes in a single package. I'm wondering if anyone has tried this and/or if there are some hidden gotchas putting this into practice, and concerned about creating problems with CRAN checks if I try this. Consider two vignettes: pkg/vignettes/vign1.Rnw,

Hello everyone. I am in the process of writing a book in Latex with Texshop, on Mac. This book contains a lot of R code, hence the need to use Sweave. I was able to compile Rnw files, and to sync back and forth from the pdf to the source Rnw. My problem now is that the book is divided in Chapters, and every chapter is in its own Rnw file. I can compile them from the main one (book.Rnw) using the

Hi list, I need to process a Rnw file and and a csv file (both are encoded in UTF-8) under Windows XP (R Version 2.11.0, i386, mingw32). I can source and run the Rnw file: > Stangle("Bericht.Rnw") Writing to file Bericht.R > source(file("Bericht.R", encoding="UTF-8")) which runs fine, but running Sweave() failed: > Sweave("Bericht.Rnw")

>>>>> Marc Schwartz <marc_schwartz at me.com> >>>>> on Sun, 13 Apr 2014 10:22:55 -0500 writes: [on the R-SIG-Mac mailing list] : > Hi all, > With R version 3.1.0 on OSX, using either the Snow Leopard or the Mavericks binary installation on a Mac with fully updated Mavericks, there has been a change in behavior since 3.0.3. I've just

Hello Does anybody have experience with Sweave run from Kile? I'm trying to make it run but have problems and don't know if the instructions are false or I do something wrong (my knowledge in bash and shell is too low to understand it)... I discovered recently Sweave and wanted to run it from my latex editor, Kile. I found and followed these instructions: > If you want to be able

Hello List, I have been using Sweave for my homework this last quarter and have been very impressed at how much time and effort it saves me. I, however, have run up against a problem which I have not been able to solve using any of the Sweave/LaTeX tricks I know. I work through my homework one problem at a time, typesetting equations and writing R code, etc. and occasionally use

Depending on an R computation I would like to include an Sweave documents in the main Sweave document. How can I do it? So I was thinking .... to use Latex features : \newif\ifpaper \ifpaper \SweaveInput{"my1.Rnw"} \else \SweaveInput{"my2.Rnw"} \fi But how do I set paper to true or false given an \Sexpr ?? \papertrue % or \paperfalse Any ideas? cheers -- Witold

Hello, I tried looking for a Sweave-specific list but didn't find one, nor did I find an answer via google, so will send this question to the general R list. Please feel free to point me in the right direction. I am using Sweave and would like to have a single .Rnw document that generates 1) a summary report, 2) a full report, 3) slides for a talk. I think my material lends itself to have

I am trying to learn the basics of Sweave so I read some things and a friend gave me his Rnw file to play with. I am able to do R CMD Sweave mark-example.Rnw. That works. But, then when I do latex mark-example.tex, I get the message below. I looked in the archives and Martin Morgan mentioned something in 2004 in terms of making sure that latex is looking at where Sweave.sty is but I am unsure