similar to: Cannot run R from command prompt

Hi All, I am trying to make R package using R 2.6.2 And I am getting following error. When I give R CMD check t1\ ---------- Making package t1 ------------ adding build stamp to DESCRIPTION making DLL ... making CGHseg_rewrite.d from CGHseg_rewrite.c making rowMedians.d from rowMedians.c making runavg.d from runavg.c gcc-sjlj -std=gnu99 -Ic:/R/R-2.6.2/include -O3 -Wall -c

Hi All, My R code takes very long time to finish the processing. I want to see at what stage the script is running. So I wrote some output messages using cat. But instead of displaying the cat messages at different stages they are buffered and displayed in the end when entire processing is done. Can you please suggest how to stop this buffering or some alternative way to display messages Thank

Hi All, I am calling some c code from R. It successfully makes the dll and .so files. When I run .so in Linux is works prefect but hangs in windows. Though the dll loads but it never returns back from the c function Can you please suggest the possible cause of this thank you vidhu [[alternative HTML version deleted]]

Hi All, I am trying to make write a table in RSQLite. And I get the error mentioned below mat<-as.data.frame(matrix(rnorm(n=244000000),nrow=244000,ncol=1000)) > dbWriteTable(con, "array", mat) [1] FALSE *Warning message: In value[[3]](cond) : RS-DBI driver: (error in statement: too many SQL variables)* Can someone please tell me what is maximum size of a table( max number of

Hi All, I have a huge tab separated file which a many columns. I want to read only few specific columns in R object. There are no column names/headers in the file. Can someone please suggest how can I do that. I checked the help of read.delim but wasnt able to find such option Thank you Reagards Vidhu [[alternative HTML version deleted]]

I changed the path to include C:\Program Files\R\R-2.3.1\bin, but Rcmd check [package] just returns an error: 'Rcmd' is not recognized as an internal or external command, operable program or batch file. Any ideas? I want to be able to compile this package on Windows. [[alternative HTML version deleted]]

Hi All, I have a .c file and I need to make a dll so that it could be called by R. I have successfully made .so from .c file and its working great. But i have no clue of making dll. I tried googling for help ...but not much of use Please suggest something regards Vidhu [[alternative HTML version deleted]]

Hi, * I am using read.table command as follow kegg<-read.table("c:/IDs.tab",header =TRUE,quote= "'", sep="\t") * Fragment of file is as follow: ID Pathway 04916 Melanogenesis 04920 Adipocytokine signaling pathway 04930 Type II diabetes mellitus 04940 Type I diabetes mellitus 04950 Maturity onset diabetes of the young 05010

I'm attempting to build an R package for distribution and am working from the directions found at http://www.maths.bris.ac.uk/~maman/computerstuff/Rhelp/Rpackages.html#Wi n-Win I've read through Writing R Extensions and various other "helpful" web sites. I've installed all relevant software (perl, cygwin, mingwin, hhc.exe). Here is what I have done so far: 1) Sourced data

Hi, I'm trying to run an R script using Rcmd Batch from the command line on a Windows Vista machine. I am using R version 2.8.1. I installed the batch files 4-3 found at http://cran.r-project.org/contrib/extra/batchfiles/ and added them to my path. I also had to install the latest version of perl (it's Strawberry perl if that makes a difference) and have added this to my path. Now when

Hi, I am trying to run a batch command on Windows XP and R CMD is not recognized. I get the error, "'R' is not recognized as an internal or external command, operable program or batch file." I have "C:\Program Files\R\rw2010\bin" in my $PATH variable and Rcmd.exe has been installed in that folder. I have restarted the computer to make sure any changes in the $PATH

Hi all, i am new here and this is my first posting. My coding experience in R ist okay, but I have a problem which is related to another aspect of R. I am searching for a surface which execute my commands in R via a click on a button OUTSIDE of R. Concrete: I will write some programs in R and want to execute this files outside of R, so I don't want to start R eyery time if i want an

2008/5/19 Prof Brian Ripley <ripley at stats.ox.ac.uk>: > Where is the bug here? It also does on a Unix-alike. Then "R CMD config --help" could at least spit out an error stating what should be installed (rather than die with an execution error straight from the DOS). Setting an "sh" in the %Path% (sh coming from cygwin) does not seem to lead to something working

Dear list members, I've encountered the following problem trying to build a package under Windows Vista (SP1). The problem occurs with both R 2.6.2 and R 2.7.0 RC (from which this output was produced). The package builds just fine on my XP (SP2) machine. Please see some further comments below. ---------- snip ------------- Microsoft Windows [Version 6.0.6001] Copyright (c) 2006 Microsoft

Hi dears, I have difficulty to build a package ! I use Windows XP HOME, with and Intel PVI 2.66Ghz processor and 512MB of memory I use RCMD check pyra1 and I got this : * using log directory 'C:/DOCS/R/pyra1.Rcheck' * using * checking for file 'pyra1/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'pyra1' version '1.0' * checking if this

Hello everyone. I am using R 2.0.1 in windows XP sp2 and I want to create a package. I get the following errors when I run these commands at the dos prompt. Please help. Thanks. NIshan F:\Program Files\R\rw2001\bin>Rcmd build f:\testingskeke * checking for file 'f:\testingskeke/DESCRIPTION' ... OK * preparing 'f:\testingskeke': * cleaning src *

I have no idea where I must R CMD build... I am using Windows 7 wiht pearl installed http://stat.ethz.ch/R-manual/R-patched/library/utils/html/PkgUtils.html its completely unclear for me ... sorry Knut

Hi, I never acutally made a package before. I have a folder, say called "john" that has everything it needs to be in a R package. Some instruction says I need Rtools from R mirror site. I installed the Rtools, but under DOS, the command "Rcmd" is still not recognized. Any suggestions? Thanks John

Hi, I am a complete newbe to R, so the following problem will probably be trivial for most of you guys: I get an error message every time I try to run a R file directly from the DOS shell. My R file (test.R) is intended to create a basic graph and has a very simple code: x<-rep(1:10,1) y<-rep(1:10,1) plot(x,y) I am using the following command to call this file directly from the c:/

Hi, I was trying to use the batch mode "rcmd" under Windows NT. The online help says the right command should be "Rcmd BATCH [options] infile [outfile]". But when I type "rcmd BATCH aaa.r" I got message of "The name specified is not recognized as an internal or external command, operable program or batch file." What is wrong? I know this is a quite